Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4491 ATGTCTCGTTCAGTTTTGGTTTCCACCATCTTTGTCCTCCTTCTCCTTCTTGTAGCCACTGGGCCAGTGGCTGAGGCAAGGACATGTGAGTCACAAAGTCACAAATTCAAAGGACCATGTGCGAGTGATCACAACTGTGCTTCTGTGTGCCAAACAGAACGTTTCCCTGGAGGACACTGCCGTGGATTCCGTCGTAGATGTTTTTGCACTACACATTGTTCTTAA 225 0.4756 MSRSVLVSTIFVLLLLLVATGPVAEARTCESQSHKFKGPCASDHNCASVCQTERFPGGHCRGFRRRCFCTTHCS* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4491 74 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Tpr4g4491 74 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Tpr4g4491 74 Pfam Gamma-thionin family 27 73 - -
Tpr4g4491 74 PANTHER DEFENSIN-LIKE PROTEIN 1 6 73 - -
Tpr4g4491 74 Gene3D - 27 73 IPR036574 -
Tpr4g4491 74 PANTHER DEFENSIN-LIKE PROTEIN P322 6 73 - -
Tpr4g4491 74 SMART gth_4 28 73 IPR003614 GO:0006952
Tpr4g4491 74 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Tpr4g4491 74 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Tpr4g4491 74 CDD Knot1 38 70 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4491 Tpr-Chr4 52857063 52857875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4491 6 73 Plant Defensins Gene Families AT2G02100 63.380 7.46e-28 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4491 - - cam:101490338 85.1149