Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4487 ATGCCCCGGGAATTGTTGAGGTTCCGCCTGATAAACCTCCATAGACCTGTTGCATATGAGATTGATACATCAGATCATTTTTACACTGAAATGGCAACCCCTGACCGAGATGAGTTGATTAGATGGGCTCGGGAGATTGCCTTAAAGCTAAAGTTTGCAATTGTAATTGGCAAATCCGACAACGGCAGCGATAAGAGGAAGCAATATTTCAGGTTGGATTGCGAGCGGGGAGGCCGGTACGTGTCAACAAATAAGAAGCTAAAATCTGATCAAACCGGCACGAGGAAATGCGGCTGTCCATTTCGACTCCGTGGTTATTGTCATGCCGATAAAACATGGCATTTGACCGTTGTAAATGGCAAACATAACCACGAGTTGGACAAGGCAGTTGAAGGCCATCTCATTGTCGGTCGTCTCAAACCGGAAGAAAGGCAATGTATGGAGGAAATGTCAAGGAATCTGGTTCCGCCTAAGAATATAATGTCAACATTGAAAGATAGGGATCCAAACAACAAGACAACGGCAAAGCAACTCTACAATTTAAGTCATCGATTAAAACTTAAAATGAGGGCATCAATGACTGAAATGCAACACCTCTCCAAAAGACTTGTCGAGACCGGGTATTTTTTCAAACATAGGACGGTTGTTGCAGACGGATCCGAACATGTTCAAGACATTTTCTTTGCACATCCTAAATCTATAAGTTTGTTCAATTCTTTTCCTACTGTGCTTTTGATGGATTCGACATACAAAAACAAACAAATACAAAATGCCGTTATTTGA 783 0.4202 MPRELLRFRLINLHRPVAYEIDTSDHFYTEMATPDRDELIRWAREIALKLKFAIVIGKSDNGSDKRKQYFRLDCERGGRYVSTNKKLKSDQTGTRKCGCPFRLRGYCHADKTWHLTVVNGKHNHELDKAVEGHLIVGRLKPEERQCMEEMSRNLVPPKNIMSTLKDRDPNNKTTAKQLYNLSHRLKLKMRASMTEMQHLSKRLVETGYFFKHRTVVADGSEHVQDIFFAHPKSISLFNSFPTVLLMDSTYKNKQIQNAVI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4487 260 Pfam Transcription factor AFT 76 126 IPR014842 GO:0000981|GO:0036086
Tpr4g4487 260 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 60 253 - -
Tpr4g4487 260 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 253 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4487 Tpr-Chr4 52832507 52833289 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g4487 AFT 7.4e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4487 - - cit:107176176 186.808