Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4470 ATGAGTAACAGTGACGTCGATAAAACCTTAAAAGAAAAGGAGCCTAAGACGCCTCCAGCAGCTACATCACAGGAGCAGTCTTCAACGACAACTGGCACTCCGGCAGTTAATCCTGAATGGGCTAACTATCAGGCATATTCTCCTATACCTCCACCTGGATACATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATGATGCCTCCCTATGGCACCCCACCACATCCTTATGTCACAATGTATCCCCATCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTATGCTATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGGAATACTCCAGGCAGCAGTGAAGCAGACGGTAAGCCTCACGAGGTGAAGGAAAAATTACCAATCAAAAGATCAAGAGGAAGTATGGGTAGTATGAATATGGTTACAGGAAGAAATAATGAACTTGGTAAAACACCAGGGGCATCTGCCAATGGAATTCATTCCAAAAGTGGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGAAGCAATGAAAACTCCCATAATGACTCTCAATTGAAATCTGGGGAGAGGCATGACTCTTATGAAGATCATGAACCTTCTCAAAATGGCAATTCGGCACATGCTCCTCAAAATGGGGTACTTAATACACCTCCTACAGTTAACCAAACTATGTCTGTCGTGCCTATGTCTGTTGCTGGTCCTCTCACAACTGTTCCTGCTCCCGCTACTAACTTAAATATAGGAATGGAGTATTGGGGAACACCAACTTCATCCACCATTCCTGCAATGCATGGAAAGGATGAAAGGGAGCTTAAAAGACAAAGGCGAAAACAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAACAGGCTGAATGTGATGAACTAGCTCAGCGTGCTGAGGTTTTGAATGAAGAAAATGCCTCTCTCCGTGCTGAACTGAGCCGGATCAAGAGTGAGTACGAGAAGGCACTTTCTGAGAATGCAGTTCTCAAGGAGAGACTCGGGGAGATACCAAGGAGCGAGGATCTTGGGCCGGGCCAGAATGATCAGCATGTGGGTGAAGTCACTCAACAGAATGGTTAG 1137 0.4626 MSNSDVDKTLKEKEPKTPPAATSQEQSSTTTGTPAVNPEWANYQAYSPIPPPGYMASSPQAHPYMWGVQHMMPPYGTPPHPYVTMYPHHGGIYAHPSMPPGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSRGSMGSMNMVTGRNNELGKTPGASANGIHSKSGGESASEGTSEGSNENSHNDSQLKSGERHDSYEDHEPSQNGNSAHAPQNGVLNTPPTVNQTMSVVPMSVAGPLTTVPAPATNLNIGMEYWGTPTSSTIPAMHGKDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENASLRAELSRIKSEYEKALSENAVLKERLGEIPRSEDLGPGQNDQHVGEVTQQNG* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4470 378 MobiDBLite consensus disorder prediction 278 292 - -
Tpr4g4470 378 MobiDBLite consensus disorder prediction 1 15 - -
Tpr4g4470 378 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Tpr4g4470 378 Coils Coil 303 351 - -
Tpr4g4470 378 CDD bZIP_plant_GBF1 288 338 IPR045314 GO:0003700|GO:0006355
Tpr4g4470 378 Pfam bZIP transcription factor 283 345 IPR004827 GO:0003700|GO:0006355
Tpr4g4470 378 MobiDBLite consensus disorder prediction 120 226 - -
Tpr4g4470 378 MobiDBLite consensus disorder prediction 272 308 - -
Tpr4g4470 378 MobiDBLite consensus disorder prediction 1 36 - -
Tpr4g4470 378 Gene3D - 286 341 - -
Tpr4g4470 378 SMART brlzneu 283 347 IPR004827 GO:0003700|GO:0006355
Tpr4g4470 378 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 285 348 IPR004827 GO:0003700|GO:0006355
Tpr4g4470 378 MobiDBLite consensus disorder prediction 130 144 - -
Tpr4g4470 378 MobiDBLite consensus disorder prediction 198 213 - -
Tpr4g4470 378 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 290 305 IPR004827 GO:0003700|GO:0006355
Tpr4g4470 378 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 281 378 - -
Tpr4g4470 378 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 281 - -
Tpr4g4470 378 Pfam Disordered region downstream of MFMR 138 276 - -
Tpr4g4470 378 SUPERFAMILY Leucine zipper domain 286 340 IPR046347 GO:0003700|GO:0006355
Tpr4g4470 378 MobiDBLite consensus disorder prediction 346 378 - -
Tpr4g4470 378 MobiDBLite consensus disorder prediction 149 197 - -
Tpr4g4470 378 MobiDBLite consensus disorder prediction 19 36 - -
Tpr4g4470 378 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 281 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr4g4470 378 PANTHER G-BOX-BINDING FACTOR 3-RELATED 281 378 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4470 Tpr-Chr4 52594309 52600737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4470 1 361 bZIP Transcription Factor Family AT2G35530 60.459 7.95e-151 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g4470 MFMR_assoc 5.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4470 K09060 - gmx:778122 532.332