Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4465 ATGGATGAGGTTAGAGTTGGTGTTAGTAGTTGTAGTAGTGAAGCAGAGCAGACTCAGTCAAGAGATACAGTTGAGGAGACGGCGGCTTCTTCGTCTTCTGGATGGCATCCTAGGGAGCTTGCTTTTGTTGCTTTTGTGCCGAGGGATAAAGAAGAACAACAAGAAGATGAACGTGTTAATGCTGCTGGGAAGTTCTTGAAATACCGTGCATTTGTTAGGAGACCTTTAGTGGGAAGATTGACAAAGGAAATAGTTGAAACATACCGAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAATCCAAAGAGATTTTTGACCAGCCCATCTACTGGAGTGCTTAATGATGGCTATGATAATGCAAACTCGGATCTTATTCTGACAGTGAATTTGATCTTGATCCATGTAGAGAAAAGTAGAAGATATATTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCCAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTCAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCTCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTACGATCCTGAGGATAAGAATCACATTGTTCGTATATATGATTATTTTGTATATCAAAGACATTTGTGCATATGCTTTGAACTGCTGGACACAAATTTGTATGAGCTTATCAAAATGAATCATTTTAGGGGATTGTCAATTGGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTGGCTCTATTAAAAGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCTCTGTGAAGCAGGCAGAAATAAAGATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTATTCCTATATTCAGAGTCGATACTATAGATCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCAGAATTGTTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAGTTTGATCTTTTGAGAAGGATGATTGAAATAATTGGAGGACAACCACCTGATTATGTACTACGGGACGCCAAAAACACTAGTAAATTCTTTAAGTGTATTGGGAGTCTCCAAAACATAGAAATCAGTGAGGGTTCCAAAAATGGACGTGTTTATCAAGCATTGACAGAGGAAGAATATGAAGCTAGAGATTTGAAGAAGCCTTCAATTGGAAAAGAATATTTTAATAATATGAATCTTGAAGCAATAGTTACAAACTACCCCTACAGGAAAAACCTACCTAAGGAAGATATTGCCAAAGAAAAGCAAACAAGACTAGCTCTTATTGACTTTTTGAGAGGGCTCGTTGAATTTGACCCTGCAAAACGCTGGTCACCATTCCAGGCTTCAAAACACCCTTTTATAACCGGGGAACCTTTTACTCACCCTTACAGACCTTCCCCCGAGACCCCTTACATTCCAGTAGTTCAAAACATCAAGGTTGATAATCATCCAGGTGGAGGACACTGGTTTGCTGCTGGTCTATCACCGAATGTTGCAGGCAAAAACAGAGCTTCCCTCTATAGCAGTCCGCATTTTCAGATGGCGCAACATCCACCTGCTAATAGTTATGGCAGTGTAGGAAGCCATGGGAGCTATAATGATGGTGCTGGGCTTGGAAGCAGCTATGGAAGTTATGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATCGCTCCATCTGGTATGAACATGCACAATCAGGGTAGTATGTCAATGCTTGGCAATAGTCCTGATGCTCGGAGAAGAATTAAGTACCAACCTGGGAATGGACTGGGTGTAAGTCCATCTGGTGGAAATTTCGCTCCCTTGCCTCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATAGTCAGATTCCAGTTGGTTCCCCAGGTCATTTTGGACCTACATCTCCTGCAAGAGGAGCTTCTCATGGATCACCTTTAGGCAAGACTGCTGCAGCCAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCTCAAACCCAAGAAACAGCATTTTCTTCACATTGGCATGGTCAATATCCTGATAGCACAAGCCAAGCAGAGGGAACATCACAAGCTCCTGGCAGTTCACCATCATATATACAATCAAATATTAATCCTGGGAACTGGAAGCAGCGCGGAAGTGGAGGGGTTTCTGCTAATCAGAAGATTCCATCCATGGTTATGCCTGGTTCTAATATGAACTCACAGTCGACGGAATTGACTCATGACAATGTGGAGACCGGTTTTTCATTGCCTGATCCTGGAGATTGGGATCCTAATTATAGTGATGAACTACTTCTGCAAGAGGGCGGTTCAGATGAAAGCTCTTTGTCAACTGAGTTTGGCAGAAGTATGAATCTTGGTTCCATAGAACCGTGGTCTGGATTTGGAAGATTAAATGGACCTGGTCAAACATTTTCTACTGTAGAGATGGGTAGCCCCCCAACACATGATTTCCAAGCAGCATATATACACTCTATGTCAAAGCCTTTTCATCTCATGCCTCATATTTCACAAAATTCTCCAAGCCGTTTTGGACACCAATCTGTTCAAAGATTTACACATGGTAGACCCCCTCAGGGTAGTGACTGGAATCAAATTAAGATTCAGGCTCCTTCTGGTTTCAGCAACGTGGGTCCGCGTTCTCCCAGGAATGCCTCATTCACTGGCAATATGCCATGGGGGCGACGAATGAATCCTCCTACTTCAAGCATTCCTCCTATCTCAAACATACCACCGACATCCCGTTCAAGAAAAGACTATGCAAGGATAGACTAG 2877 0.4185 MDEVRVGVSSCSSEAEQTQSRDTVEETAASSSSGWHPRELAFVAFVPRDKEEQQEDERVNAAGKFLKYRAFVRRPLVGRLTKEIVETYRICNPQFKYSEDLNPKRFLTSPSTGVLNDGYDNANSDLILTVNLILIHVEKSRRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKNHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSIGIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSSVKQAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEIIGGQPPDYVLRDAKNTSKFFKCIGSLQNIEISEGSKNGRVYQALTEEEYEARDLKKPSIGKEYFNNMNLEAIVTNYPYRKNLPKEDIAKEKQTRLALIDFLRGLVEFDPAKRWSPFQASKHPFITGEPFTHPYRPSPETPYIPVVQNIKVDNHPGGGHWFAAGLSPNVAGKNRASLYSSPHFQMAQHPPANSYGSVGSHGSYNDGAGLGSSYGSYGESSNMFAYYSPIAPSGMNMHNQGSMSMLGNSPDARRRIKYQPGNGLGVSPSGGNFAPLPLGASPSQFTPPSSYSQIPVGSPGHFGPTSPARGASHGSPLGKTAAASQFNRRKNWGHSGSPQTQETAFSSHWHGQYPDSTSQAEGTSQAPGSSPSYIQSNINPGNWKQRGSGGVSANQKIPSMVMPGSNMNSQSTELTHDNVETGFSLPDPGDWDPNYSDELLLQEGGSDESSLSTEFGRSMNLGSIEPWSGFGRLNGPGQTFSTVEMGSPPTHDFQAAYIHSMSKPFHLMPHISQNSPSRFGHQSVQRFTHGRPPQGSDWNQIKIQAPSGFSNVGPRSPRNASFTGNMPWGRRMNPPTSSIPPISNIPPTSRSRKDYARID* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4465 958 Gene3D Phosphorylase Kinase; domain 1 107 223 - -
Tpr4g4465 958 MobiDBLite consensus disorder prediction 906 958 - -
Tpr4g4465 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Tpr4g4465 958 PANTHER DUAL SPECIFICITY PROTEIN KINASE 30 901 - -
Tpr4g4465 958 PANTHER BNAC04G29850D PROTEIN 30 901 - -
Tpr4g4465 958 Gene3D Transferase(Phosphotransferase) domain 1 224 486 - -
Tpr4g4465 958 SUPERFAMILY Protein kinase-like (PK-like) 138 508 IPR011009 -
Tpr4g4465 958 MobiDBLite consensus disorder prediction 1 33 - -
Tpr4g4465 958 Pfam Protein kinase domain 144 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4465 958 MobiDBLite consensus disorder prediction 906 922 - -
Tpr4g4465 958 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Tpr4g4465 958 MobiDBLite consensus disorder prediction 691 730 - -
Tpr4g4465 958 SMART serkin_6 143 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4465 958 MobiDBLite consensus disorder prediction 10 33 - -
Tpr4g4465 958 CDD PKc_YAK1 143 485 - -
Tpr4g4465 958 MobiDBLite consensus disorder prediction 929 949 - -
Tpr4g4465 958 ProSiteProfiles Protein kinase domain profile. 143 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4465 Tpr-Chr4 52544248 52555669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4465 139 372 MAP Kinase Gene Family AT1G18150 33.878 1.61e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Tpr4g4465 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4465 K18670 - gmx:100792777 1611.66