Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4451 ATGACATCTGAAGAAAATAATGATGCTAGTGATTGGCACTTGGAAGCTCTTAAAGATTATACTTCTATATATGCAGATGAACATGTAAGTTCTTTACCATTTCATGAACCACAATATGAACTCTTTCCACAAGTCCATAACATTGATGAGTTGGTTCCTTTTGAAGGACAAATATTTAACAGTGATGATGATGCTTATGATTTTTATTCTTTATTTGCACGAAAAAATGGATTTTCGATTAGACGTGATCATGTTTATCGATCTTGTATACACGAGTCTGAGCATAATCCAATGGGTGTTTATAAAAGGGAATTTGTTTGTCATCGTGGTGGTATTGTTAAACAACGCAAAATTAATGAAGTGGAAAGTAAAAGGAAACGAAAATCATCAAAATGTAATTGTATGGCAAAAATGTTGGTTGCTAAGAGAACAATTGATTTAGAGGAAAAATGGGTGATTACATATTTCAACAATTATCACAATCATGATTTATTGGATGACAAAGAGGTTCAATTTCTTCCTGCTTATCGTAATATCCCAATTGCTGATCAAAGTCGTATTCTGTTGTTGTCGAAAGCTGGTTGCGCTATAAGTCTTATAACGAGAGTGCTTGAGTTAGAGAAAGGAATAGATACAGGTAGCCTACCATTTTTAGATAAAGATATTCGAAATTTTATTCAATCCCAAAGTAGTATTGGTAAAGAAAATGATGCTTCTGATGTTCTCAAATTATGCAAAAGTTTGAAAGATATTGATGATGACTTCAAATATGAGTTCACTATTGATGAAAATAACAAATTGGAGCATATTATTTGGGCATTTGGTGATTCAATTAGAGCATATGAAACTTTTGGAGATGTTGTAGTTTTTGATACCACATATAGAATAAACCGTTATGATATGCCGCTTGGACTATGGGTTGGTGTTGATAATCATGGAAATTCCATTTTCTTTGGTTGTGTTCTATTGCGAGATGAGAAGATTCCATCTTTCACATGGGCTTTAAAGAATTTCCTTGCTTTTGTCCAAGGAAAATATCCAAAAACAATTCTTACAGACCAAGATCTCGCACTTAAGGAAGCCATTGCAATGGAATTGCCAAACACAAAACATGCATTTTGTATATGGCATATTGTTTCAAAGTTGTCAAGTTGGTTTTCTTTTGCGTTGGGTTCAAGATATAATGACTTTAAACAAGAGTTTCATAGGATTATGTTGATAGGAGATTTTATGTAG 1236 0.3285 MTSEENNDASDWHLEALKDYTSIYADEHVSSLPFHEPQYELFPQVHNIDELVPFEGQIFNSDDDAYDFYSLFARKNGFSIRRDHVYRSCIHESEHNPMGVYKREFVCHRGGIVKQRKINEVESKRKRKSSKCNCMAKMLVAKRTIDLEEKWVITYFNNYHNHDLLDDKEVQFLPAYRNIPIADQSRILLLSKAGCAISLITRVLELEKGIDTGSLPFLDKDIRNFIQSQSSIGKENDASDVLKLCKSLKDIDDDFKYEFTIDENNKLEHIIWAFGDSIRAYETFGDVVVFDTTYRINRYDMPLGLWVGVDNHGNSIFFGCVLLRDEKIPSFTWALKNFLAFVQGKYPKTILTDQDLALKEAIAMELPNTKHAFCIWHIVSKLSSWFSFALGSRYNDFKQEFHRIMLIGDFM* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4451 411 Pfam MULE transposase domain 287 380 IPR018289 -
Tpr4g4451 411 Pfam FAR1 DNA-binding domain 67 165 IPR004330 -
Tpr4g4451 411 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 50 404 - -
Tpr4g4451 411 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 404 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4451 Tpr-Chr4 52346552 52348459 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g4451 FAR1 1.3e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4451 - - ccaj:109802755 582.408