Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4450 ATGTTTACATGCATAGCTTGTACGAAACAAACATCAGATGAGAGGGATGAAGATGGGCGTGAGAGTGGCACGCCTAATACTAAAGAAGCCGTCAAAAGCCTTACTACTCAGATAAAGGATATGGCGCTAAAGTTTTCGGGTGCTTACAAGCAATGCAAACCCTGCACAGGAGGATCAAGCAGCTACAACAAGAAAGGAAATAGACCATATCCAGATTTTGACACAATCTCAGAAGGTGTTCCATACCCTTATATTGGAGGTGCAAGTTCAAGTTCAACTCCTGCATGGGACTTCACTACTTCTAACTACCCTGGTGCAAGATATGCCGGAGACCGTACCCCTAGAGGACGCGACTCTGCATCCGTCTGTGATGTAGTGTTAGAGGATGAGGATGAACCTAAGGAATGGATGGCACAGGTTGAGCCAGGGGTTCATATTACCTTTGTTTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGTTTCAGCCGTGAGATGTTCAATAAATGGCAAGCTCAAAAATGGTGGGGCGAGAATTACGACAGAATCATGGAACTTTACAATGTCCAACGATTTAATAGACAAGCTCTCAACACTCCTCCAAGATCTGAGGCCGATGAGCAAAGAGATTCTACTTACTCGCGATTGACATCAGCATCAGCAAGAGAAAGTCCTATGGCATCAGTTAAGGATTGGACACCACGAAGTCACTACAAACCATCTGGACAGTTAGATCAAGGCGGAGGCCACCACTTTCAAGCAGGGTCATCTATGGAACCGTCAAGGGCAACCACATCATCTAGAGATGAACCTTCTATTAGCAATGCAAGTGAAATGGAGTCAGAATGGGTTGAACAAGATGAGCCTGGAGTTTACATTACAATCAGACAGTTATCCGATGGTACTAGGGAACTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGCGAGGTAAATGCAAAAACATGGTGGGAAGAGAACAGAGAAAGAATACAATCTCAATACCTTTGA 1014 0.4438 MFTCIACTKQTSDERDEDGRESGTPNTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGGSSSYNKKGNRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSNYPGARYAGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQKWWGENYDRIMELYNVQRFNRQALNTPPRSEADEQRDSTYSRLTSASARESPMASVKDWTPRSHYKPSGQLDQGGGHHFQAGSSMEPSRATTSSRDEPSISNASEMESEWVEQDEPGVYITIRQLSDGTRELRRVRFSRERFGEVNAKTWWEENRERIQSQYL* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4450 337 MobiDBLite consensus disorder prediction 10 25 - -
Tpr4g4450 337 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 337 - -
Tpr4g4450 337 MobiDBLite consensus disorder prediction 258 281 - -
Tpr4g4450 337 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Tpr4g4450 337 MobiDBLite consensus disorder prediction 254 286 - -
Tpr4g4450 337 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Tpr4g4450 337 Pfam Transcription factor regulating root and shoot growth via Pin3 281 336 IPR013591 -
Tpr4g4450 337 ProSiteProfiles BRX domain profile. 282 337 IPR013591 -
Tpr4g4450 337 MobiDBLite consensus disorder prediction 198 236 - -
Tpr4g4450 337 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Tpr4g4450 337 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 337 IPR044532 -
Tpr4g4450 337 MobiDBLite consensus disorder prediction 10 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4450 Tpr-Chr4 52301829 52309481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4450 1 337 Major Intrinsic Protein MIP AT1G31880 67.778 4.17e-165 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4450 - - ccaj:109789470 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4450 4 52301829 52309481 Tpr4g4450 4 52301829 52309481 ECH