Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4449 ATGGAGAGGTACAAATTAATTAAGGAAGTTGGTGATGGTACATTTGGGAGTGTCTGGAGAGCCATTAATAAGCAAAGCGGTGAAGTTGTTGCGATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTACGAAAAATGACTCACTCAAATGTTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACCTTGTTTTTGAGTACATGGAATGTAACCTCTACCAACTTATGAAAAAAAGGGAAAAGCCGTTTTCTGAAGATGAAGTTAAAAATTTGTGTTTTCAAGTTTTCCAAGGTCTTGCATACATGCACCAGCGTGGATACTTTCATCGTGATCTAAAGCCTGAAAACTTGTTAGTCACCAAGGATATTATCAAAGTTTCTGATTTCGGCCTAGTGCGAGAGATCAGCTCACAACCACCCTATACCGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTTTTGCTTCAGTCTTCCCTTTATAGCTCCAAAGTTGACATGTGGGCTATGGGTGCTATTATGTCTGAGTTGTTCACTCTCAGTCCTCTATTTCCGGGTACCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTGATAGGTAGTCCAACTGCTGAATCCTGGACTGATGGTCTCAAACTTGCTAGGGATATCAACTATCAGTTTCCACAGCTAGCTACTGCAGATCTCTCTCTACTGATTCCATCCAGAAGCGATGATGCAATCAACCTTATAAAATCACTATGTTCATGGGATCCCTGCAAGAGACCTTCTGCATCAGAGGCCCTTCAGCATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCGCTTCGCAACAGAGCAGTAGCCAGAACTCCTCCATCTGCTGGAATAAGGGGATCGGTGGATCGACAAGGGGTCAAGAGACTTTCTGGTGCATTGCCTAATTCAAAACTTGCCACAAATTTTTCTTCCCCCAAATTACGTCCTGCTTTAGCTCCAGGTGTGCAACGAAAGCTGGATATGGCAAATGAGGATGGAATTAAAAATAAGAAACCAGTGAAGACTACTCAACAATCAAAATATCAACCGCCAGGAAAAGACAGCCCGACTTCTATAAACAAGTGGAGGACTGCACGTGGAGTTTCAGCAACAGCTGACAAGTTAGCCAACATGTCAATGGCTACTCGAAGACAATCCTTGGGTCAAACCCGTCCACCTCCTATGAAGGCCGGAGTTAATTGGAATTCTGAATCTGGTAACATCCTGCTCAGGTCCTCCCAACAGATTCCAACTGGAAGAACTTTCACGAAAAGGGTTGCTGGATGA 1356 0.4329 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMTHSNVVKLKEVIRESDILYLVFEYMECNLYQLMKKREKPFSEDEVKNLCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKVSDFGLVREISSQPPYTEYVSTRWYRAPEVLLQSSLYSSKVDMWAMGAIMSELFTLSPLFPGTSEADEIYKICSVIGSPTAESWTDGLKLARDINYQFPQLATADLSLLIPSRSDDAINLIKSLCSWDPCKRPSASEALQHPFFQSCFYIPPSLRNRAVARTPPSAGIRGSVDRQGVKRLSGALPNSKLATNFSSPKLRPALAPGVQRKLDMANEDGIKNKKPVKTTQQSKYQPPGKDSPTSINKWRTARGVSATADKLANMSMATRRQSLGQTRPPPMKAGVNWNSESGNILLRSSQQIPTGRTFTKRVAG* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4449 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 427 - -
Tpr4g4449 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Tpr4g4449 451 CDD STKc_MAK_like 4 283 - -
Tpr4g4449 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4449 451 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Tpr4g4449 451 MobiDBLite consensus disorder prediction 353 380 - -
Tpr4g4449 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Tpr4g4449 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4449 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4449 451 PANTHER - 1 427 - -
Tpr4g4449 451 MobiDBLite consensus disorder prediction 362 380 - -
Tpr4g4449 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Tpr4g4449 451 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4449 Tpr-Chr4 52290298 52297686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4449 1 290 Core Cell Cycle Gene Families AT3G48750 37.248 2.39e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Tpr4g4449 Pkinase 6.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4449 K08829 - gmx:100784474 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4449 4 52290298 52297686 Tpr4g4449 4 52290298 52297686 ECH