Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g4448 | ATGGAGAAAACAAGATCCTCAGATCATGTTGTTCTCTTCATTGACCAACAAAACAACCCTAAACCTTCCACAATGGAAACTGAAACTCACAACAACACTGAACCTCATCAAGAGAAGCCCAAACATCCCTTAAGAGCAAAAACCCTTAACCGTCTAAGCTTCTCCAAACCCAAATCTCGAATCCTTGAATACAGTCATCCACACCGCAACAAACTATCTACCGCCGATGAAGAAGAAGACACTCATTTACCTTCATACAAGATTTCTTCTGATGACGAAGACGACAATAACTATGAATACAAGGAAGAAGAATCGGAAGATGATTACGATGAGGCTTTGCACGATCCAAAGTTAAACAACAAAAAGAAAAAATTTAAAGTGAAGTGGAGGCTAGTTTTTGAGTGGATACTATTTATAAACATATTAACATGTTTGGTTTGTTCTCTCGTAGCAAAACGCATAAAAAACATGCATATATTAGGGTTAGAGGTTTGGAAATGGTGTTTAATGGCAATGGTCACATTTAGTGGCCGTTTATTTTCAAGTTGGTTGGTTAGTTTAACCGTTTTTTTCGTCTTAAGAAACTTCATGTTAAGAGAAAAAGTTTTATATTTCATCTATGGTTTACGAAACAGCATTCGTAATTGTTTATGGTTAGGGCTCGTTTTAATGTCATACTGGAGTTTAGTTTTTGAAGATGTCCAAAAGAAAAACCATAAATTCCTTAACAAAGTGTTTCAAGCCCTTGTCGCGGTTTTAGTAGGTGCAACAATTTGGCTAGTGAAAATTATTTTGGTAAAAATGTTAGCTTCTTCATTTCATGTGACAACATATTTTGATAGGATGAAAGAGAGTGTTTTTCATCATTATGTGTTGGATGCATTGTCGGGTCCACCGGTTGAAAACAAAGAAGAAATATCGAAAGAGCATCATTTGTTGGGATCGAAGACGATGCCAGTGGGTGCGGGGAGGTGGAAGAAGATGAAGAGATTTGGTTCGAGGAGGATTGATATGGAGAAGTTGAAGAAACTTAGTATGGAGAGTAGTGGTTCTGCTTGGAGTGTTAAAAGGCTTGTTAATTATGTTAGGTCTTCAGGTTTGTCTACCATTTCTAGGACTGTTGATGATTTTGGTAATAGTGAGAGTGAGATTAGTAGTGAATGGGAAGCTAGAAGTTGTGCTCAGAAGATTTTCAACAATGTTGCTAAACCTGGTGCTAAGTATATTGAAGAGGAAGATCTCATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTTCCACTCTTTGAAGGTGCTCTTGAAACTGGAAAAATTAGCAGATCCTCATTTAGAAATTGGGTGATTCGAGCATATTATGAAAGAAAAGCACTAGCACAATCATTGAATGATACAAAAACAGCAGTGCAACAACTTCACAAATTAGCAAGTGCAGTAGTGAGTGTGATAATAATAATTGTGACACTTTTGGTGATGGAAGTAGCTACAATGAAGATAATATTGTTTTGTATCACACAAACTGTTTTAATAGGAGTTGCATTTCAAGGCACTTGCAAAACTGTCTTGGAAGCTATTATCTTTGTCTTCATCATGCATCCTTTTGATATTGGAGACCGTTGTGTTATTGATGGTGTTCAGATGATTGTGGAAGAAATGAATATCTTGACAACAGTGTTTCTTCGATATGACAATGAGAAAATATATTACCCTAATGCTGTCTTGCTCACTAAGCCAATAAGCAATTTTTATAGAAGTCCAGAGATGTGTGATGCAATTGATTTCACCATTGATGTCACAACTCCTATAGAGACTATCATTACACTCAAGAAATCAATAAAAATGTACATTGAGAGCAAACCAAAGTATTGGAATCCAAAGCACAGTGTGATGGCAAAACAAATAGATCATGTGGACAAGTTAAGGTTATGTTTATGTGTGCAACACACCATTAACCATCAAAACTATGGTGAGAGAAGCACTAGAATATCAGAACTCATCTTGGAGTTGAAAAAGATGTTTGAGATTCATGGTATCAAGTACCATCTTCTTCCTCAAGAAATCCATCTCACTCAAATGAATATTGGAAATGGGAGAAATTTGTTTCAATCATGA | 2112 | 0.3608 | MEKTRSSDHVVLFIDQQNNPKPSTMETETHNNTEPHQEKPKHPLRAKTLNRLSFSKPKSRILEYSHPHRNKLSTADEEEDTHLPSYKISSDDEDDNNYEYKEEESEDDYDEALHDPKLNNKKKKFKVKWRLVFEWILFINILTCLVCSLVAKRIKNMHILGLEVWKWCLMAMVTFSGRLFSSWLVSLTVFFVLRNFMLREKVLYFIYGLRNSIRNCLWLGLVLMSYWSLVFEDVQKKNHKFLNKVFQALVAVLVGATIWLVKIILVKMLASSFHVTTYFDRMKESVFHHYVLDALSGPPVENKEEISKEHHLLGSKTMPVGAGRWKKMKRFGSRRIDMEKLKKLSMESSGSAWSVKRLVNYVRSSGLSTISRTVDDFGNSESEISSEWEARSCAQKIFNNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASAVVSVIIIIVTLLVMEVATMKIILFCITQTVLIGVAFQGTCKTVLEAIIFVFIMHPFDIGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIYYPNAVLLTKPISNFYRSPEMCDAIDFTIDVTTPIETIITLKKSIKMYIESKPKYWNPKHSVMAKQIDHVDKLRLCLCVQHTINHQNYGERSTRISELILELKKMFEIHGIKYHLLPQEIHLTQMNIGNGRNLFQS* | 704 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g4448 | 703 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 4 | 700 | IPR016688 | - | |
Tpr4g4448 | 703 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Tpr4g4448 | 703 | Gene3D | - | 533 | 582 | IPR023408 | - | |
Tpr4g4448 | 703 | MobiDBLite | consensus disorder prediction | 1 | 112 | - | - | |
Tpr4g4448 | 703 | PIRSF | Memb_At2g17000 | 3 | 702 | IPR016688 | - | |
Tpr4g4448 | 703 | SUPERFAMILY | Sm-like ribonucleoproteins | 524 | 582 | IPR010920 | - | |
Tpr4g4448 | 703 | Pfam | Mechanosensitive ion channel | 474 | 679 | IPR006685 | GO:0016020|GO:0055085 | |
Tpr4g4448 | 703 | MobiDBLite | consensus disorder prediction | 61 | 94 | - | - | |
Tpr4g4448 | 703 | MobiDBLite | consensus disorder prediction | 95 | 110 | - | - | |
Tpr4g4448 | 703 | MobiDBLite | consensus disorder prediction | 10 | 30 | - | - | |
Tpr4g4448 | 703 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 4 | 700 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g4448 | Tpr-Chr4 | 52272126 | 52279336 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g4448 | 40 | 693 | Mechanosensitive Ion Channel Family | AT5G12080 | 43.169 | 0.0 | 551 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g4448 | K22048 | - | gmx:100813521 | 1067.76 |