Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4443 ATGTATCAGAATACAATTGATATGGCTACCACCGTCACAACGCGGTCTCCAACTCAATGGAGTCGTGAAGACGGAAAGATTTTCGAAAGAGCTCTTTTGATGGTACCGGAGAATTCACCTAACCGGTGGGAGAAGATTGCTGAAAAAGTTCCCGGTAAGTCGGCTGCAGAAGTGAAGGATTACTATCAAGATTTGGATCATGAAATTTCGGAAATTGAAGCCGGTCGGGTTGAGATTCCGATTTATCCTGATGACCTGGCTGAAAGTGGTGGCAGTGGATCGTCTGATTCGGAGAAAGAAACACCATGGACTAAAGAAGAACAAAGGTTGTTTCTTGCTGAGCTTGAGAAATATGAGAAAGAAGATTGGTTTCAGAAGCGTTTCAAGATATTATCTTGGGACAAGAACACACACAGGTAG 420 0.4333 MYQNTIDMATTVTTRSPTQWSREDGKIFERALLMVPENSPNRWEKIAEKVPGKSAAEVKDYYQDLDHEISEIEAGRVEIPIYPDDLAESGGSGSSDSEKETPWTKEEQRLFLAELEKYEKEDWFQKRFKILSWDKNTHR* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4443 139 SMART sant 16 68 IPR001005 -
Tpr4g4443 139 CDD SANT 20 65 IPR001005 -
Tpr4g4443 139 ProSiteProfiles Myb-like domain profile. 20 66 IPR001005 -
Tpr4g4443 139 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 11 123 IPR043363 -
Tpr4g4443 139 MobiDBLite consensus disorder prediction 82 105 - -
Tpr4g4443 139 PANTHER TRANSCRIPTION FACTOR DIVARICATA-LIKE ISOFORM X1 11 123 - -
Tpr4g4443 139 SUPERFAMILY Homeodomain-like 15 65 IPR009057 -
Tpr4g4443 139 Pfam Myb-like DNA-binding domain 19 64 IPR001005 -
Tpr4g4443 139 Gene3D - 11 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4443 Tpr-Chr4 52100160 52100847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr4g4443 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4443 - - gmx:548010 120.553