Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4438 ATGAGGCCACGCAACAACAACAACAACAATAACAGATTCGTTTTCAATTTCAACAACAACCAATATTCAAGCCCCACCGAATCACGTCGACGAAGAATCGCGTTTCCGAAGCGATTATTACTCGATTTAATGGCGGGACAATCAAGGAAATGGATGATCCTTGTTGTTACGATATGGATTCAAGCATTTACAGGAACGAATTTTGATTTCTCACAATATTCATCTTCGTTGAAATCTGCGCTTGAGATTTCGCAGGTTCAGCTTAATTACTTAGCTACTGCGAATGATATGGGAAAGGTTTTTGGTTGGTCTTCTGGTTTAGCTCTTATGCATCTTCCTGTTTCGGTTGTTATGTTTATTGCTGCTTTTATGGGGTTTCTTGGTTATGGTCTTCAATGGCTTCTTATCAATCATTTCATCTCTTTGCCTTATTTTCTGGTGTTTCTTCTGTGTCTTTTAAGTGGCTGTAGCATCTGCTGGTTCAACACAGTATGTTTTGTGCTCTGCATTAGGAATTTTCCGATTAACCGAACACTTGCATTATCACTTACTGTGAGTTTCAATGGTGTTAGTGCAGCCCTTTACACCCTTGCTGCCAATTCAATAGACCCTTCGTCTGATTCACTGTATCTTCTTTTGAATGCTCTTGTTCCCCTTCTTGTTTGCATTGCAGCAGTTATTCCGATTCTTCGCCAACCGCCTTTAGATCCTCTCCCTCCTGATGCAGTTAACCGGGACTCATTAATATTTCTAATCTTGAACTTCTTAGCCATTTTCACCGGCCTTTATCTACTCTTGTTTGGCGCATCTGCTTCTTCTGTGGCTTCCTCTCGGCTCCACTTTGGCGCAACCGTTCTTCTCCTCACCCTCCCGTTGTTTATTCCTGGCATTATATATGCTCGCTCGTGGGCTCAGCGTACCATCCATTCCAGCTTTCGGATAGAAGGATCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGCTGCATAAAGAACTACTTAGCCATCACAGTAGTCTTGTTGGTAATGGAGATGACAACGGAGATGCTTACAACCTGCAAAGTGACAATGGATCCATGTTTTCAAGTCGAAAGGAAAGCGATAATGATGTGTGTTGTGAAAGGATGATTGGCCATGATCAGTTGACAATGCTAGGAGAAGAGCACTCAGTTGCAGTGATTGTCCGAAGATCAGATTTTTGGCTATACTACATTACATACTTCTGTGGAGGTACAATTGGTCTTGTCTATAGCAATAATCTGGGACAAATTGCTCAATCTTTAGGCCTGAGTTCAAGTACGTCTACCCTTGTTACTCTATATGCATCCTTTTCGTTTTTCGGCCGCTTGCTTTCAGCTGTACCAGACTATATTCGTAGTAAGTTCTACTTTGCAAGAACTGGTTGGATCTCCGTCGCACTTATACCAACACCAATTGCGTTTTTCTTGCTCGCGTCATCAGGCACTTCTCTGGCTCTGTATACAGGCACCGCACTAATAGGGTTGAGTTCTGGATTCATATTTGCAGCCGCCGTTTCAGTTACATCTGAACTGTTTGGACCCAACAGTGTAGGTGTCAATCACAACATTCTCATAACAAATATCCCAATTGGTTCGCTTCTCTATGGTTTTCTTGCCGCACTAGTTTATGATGCCAATGCACAGTCAACACCGGGAAACTTTACAACGTCTGACTCGGTAGTTTGCATGGGAAGGCAATGCTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTAGGTTCTAGTGTGCTGTTATTCCTAAGAACCAAACATGCATATGAACATTTTGAGAAACACCGTATTACGACGCAAGTTATCGTGTCTTAA 1860 0.4247 MRPRNNNNNNNRFVFNFNNNQYSSPTESRRRRIAFPKRLLLDLMAGQSRKWMILVVTIWIQAFTGTNFDFSQYSSSLKSALEISQVQLNYLATANDMGKVFGWSSGLALMHLPVSVVMFIAAFMGFLGYGLQWLLINHFISLPYFLVFLLCLLSGCSICWFNTVCFVLCIRNFPINRTLALSLTVSFNGVSAALYTLAANSIDPSSDSLYLLLNALVPLLVCIAAVIPILRQPPLDPLPPDAVNRDSLIFLILNFLAIFTGLYLLLFGASASSVASSRLHFGATVLLLTLPLFIPGIIYARSWAQRTIHSSFRIEGSSFILVHDDDLELHKELLSHHSSLVGNGDDNGDAYNLQSDNGSMFSSRKESDNDVCCERMIGHDQLTMLGEEHSVAVIVRRSDFWLYYITYFCGGTIGLVYSNNLGQIAQSLGLSSSTSTLVTLYASFSFFGRLLSAVPDYIRSKFYFARTGWISVALIPTPIAFFLLASSGTSLALYTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAQSTPGNFTTSDSVVCMGRQCYFWTFVWWGCISVLGLGSSVLLFLRTKHAYEHFEKHRITTQVIVS* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4438 619 Gene3D MFS general substrate transporter like domains 395 610 IPR036259 -
Tpr4g4438 619 Pfam Nodulin-like 50 295 IPR010658 -
Tpr4g4438 619 Gene3D MFS general substrate transporter like domains 5 229 IPR036259 -
Tpr4g4438 619 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 31 619 - -
Tpr4g4438 619 SUPERFAMILY MFS general substrate transporter 384 602 IPR036259 -
Tpr4g4438 619 SUPERFAMILY MFS general substrate transporter 32 233 IPR036259 -
Tpr4g4438 619 PANTHER NODULIN-LIKE/MFS TRANSPORTER 31 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4438 Tpr-Chr4 52073256 52078606 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4438 1 613 Nodulin-like Gene Family AT1G31470 55.072 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4438 - - cam:101496594 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4438 4 52073256 52078606 Tpr4g4438 4 52073256 52078606 ECH
Tpr2g1334 2 15610064 15615894 Tpr4g4438 4 52073256 52078606 PCT