Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4435 ATGGACCAATTGTTAAGTCTTGTGATATGTACACTGCTATTACTAAAATCAGCTGAAGGTGTTGCTGTGCCAATCACTTATGTTCAAAGTGCAGTTGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTACCACTTTGATAAGGGATTTGAAGGTGGTATTGACAACTGGATTGTTCATTTTGAGGGAGGAGGATGGTGCAACAATGCCACTACTTGCCTTGACCGAGTTAACACTCGTTTAGGATCATCGAAGAAAATGGACACGACACTTTCCTTTTCGGGATTTTTTAGCAGCGGCAAAAAGTTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTAGGTATTGTGACGGTTCATCATTTACCGGTGATGTTGAAGCTGTCGATCCAAAAACCAATTTGCACTACAGAGGAGGAAGGATTTTTGTTGCTGTCATTGAGGATTTACTTGCAAAAGGAATGAAAAATGCTAAAAACGCAATTCTCTCTGGATGTTCAGCTGGAGGATTGACTTCTATTTTACAATGCGATCGCTTTAAAACTTTACTACCTGCAGCAGCTAAAGTTAAATGTGTCTCAGATGCTGGTTATTTTATCAATGTAAAGTCCGTCTCTGGATCACAACACATTGAACAATTCTACAGTCAAGTTGTTCAAACTCATGGCTCAGCAAAGAATTTGCCTTCATCTTGCACTTCAAGACTCCCAGCAGGGCTGTGTTTTTTCCCGGAAAACGTGGCCGCACAAATCAGGACTCCAATCTTCTTTGTAAATGCAGCCTATGATTCATGGCAGATTAAGAACATTTTGGCACCCGGTGTTGCCGATCCCCATGGCACTTGGAGGAACTGCAAACTTGATATAACCAAATGTTCATCTACTCAATTAAATACAATGCAAGGTTTTAGGACAGATTTCTTAAAGGCAATTAGTGGGATTAGTAACTCTCCATCTAAAGGAGCGTTTATAGATGGTTGCTATGCCCACTGCCAAACTGGAATACAGGAAACATGGATGAGAAATGACTCTCCAGTGCTGGCCAAGACAACAATAGCAAAGGCAGTAGGAGATTGGTATTATGAGAGAAGGACTTTTCATGAGATAGATTGTCCTTACCCTTGCAACCCTACTTGTCATAACCGTATTTTTGAGTAA 1167 0.4079 MDQLLSLVICTLLLLKSAEGVAVPITYVQSAVAKGAVCLDGSPPAYHFDKGFEGGIDNWIVHFEGGGWCNNATTCLDRVNTRLGSSKKMDTTLSFSGFFSSGKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHYRGGRIFVAVIEDLLAKGMKNAKNAILSGCSAGGLTSILQCDRFKTLLPAAAKVKCVSDAGYFINVKSVSGSQHIEQFYSQVVQTHGSAKNLPSSCTSRLPAGLCFFPENVAAQIRTPIFFVNAAYDSWQIKNILAPGVADPHGTWRNCKLDITKCSSTQLNTMQGFRTDFLKAISGISNSPSKGAFIDGCYAHCQTGIQETWMRNDSPVLAKTTIAKAVGDWYYERRTFHEIDCPYPCNPTCHNRIFE* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4435 388 Pfam Pectinacetylesterase 17 368 IPR004963 GO:0016787
Tpr4g4435 388 PANTHER NOTUM-RELATED 2 387 IPR004963 GO:0016787
Tpr4g4435 388 PANTHER PECTIN ACETYLESTERASE 2 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4435 Tpr-Chr4 52038609 52044340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4435 1 387 Carbohydrate Esterase AT4G19420 56.872 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4435 K19882 - gmx:100781246 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4435 4 52038609 52044340 Tpr2g1328 2 15533379 15543163 PCT