LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g4422	ATGGAAATTACTACTTTGTTTTTGTATTTTGCTTCTTTTCTCTTCATTGTTCTGTTCAAATCACTCATCAAATCTTTCTTATTTCCTTCCAAAAATGGAAAACAATTGCCACTCCCTCCTGGCTCTATGGGTTACCCTTACATAGGAGAGACTTTTCAAATGTATTCTCAAGATCCTAGTCTTTTCTTTGCCAACAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCAGCAAAATTTGTGTTAAACAAAGCTCAATTATTCAAACCAACATTTCCAGCTAGCAAAGAAAGGATGTTAGGAAAACAAGCAATTTTCTTTCATCAAGGAAATTACCATGCTAACCTTAGAAGACTTGTTCTTCGTACCTTCATGCCTGAAGCCATCAAAAGCATTGTTCCTAATATTGAATCCATTGCTCAAAGTTGTCTCAAATCATGGGAGGGAAATTTAATCACCACTTATCTTGAAATGAAAACATTCACCTTCAACGTAGCACTTCTATCAATTTTTGGAAAAGATGAAATTCTATACAGAGAAGATCTTAAAAGATGCTACTACACACTTGAAAAAGGGTACAATTCAATGCCAATAAACCTTCCAGGAACACTTTTCAACAAAGCTATGAAAGCAAGAAAAGAGCTTGCACAAATCTTAGAACAAATAATCTCAACAAGGAGGTGCAAAAAGCAAGAATACAATGATTTATTAGCTTCATTCATGGATGAAAAAGCAGGACTAAGTGATGAACAAATATCAGATAATATCATTGGTGTTATTTTTGCTGCTAGAGATACAACTGCTAGTGTGCTGACGTGGATTGTTAAGTACCTTGGTGAAAATCCTAGTGTCCTTGAATCAGTCACAGAAGAACAAATGTCTATAATTGAGGGAAAACAAGGAAATGGTGAAGAAATTGGTCTAAAATGGGAAGACACAAAAAATATGCCAATAACTTCAAGGGTCATACAAGAGACTCTTAGAGTAGCATCAATTTTGTCTTTTACTTTCAGAGAAGCAACTGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGATGGAAAGTATTGCCACTTTTCAGAAATATACATCATAGTCCAGAAAATTTCAAAGAGCCAGAAAAATTTGATCCTTCAAGATTTGAGGTTGCTCCTAAACCTAATACTTTCATGCCATTTGGAAATGGGACCCATGCTTGTCCTGGCAATGAATTAGCAAAGTTAGAGATTTTGGTTCTTGTACATCATCTAACCACAAAGTACAGATGGTCAGTGGTCGGTGAAAAAAATGGAATTCAATATGGTCCTTTTGCTCTTCCACAAAATGGTTTACCAATCAACTTATATTCCAAGAAATAG	1404	0.3504	MEITTLFLYFASFLFIVLFKSLIKSFLFPSKNGKQLPLPPGSMGYPYIGETFQMYSQDPSLFFANKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGNYHANLRRLVLRTFMPEAIKSIVPNIESIAQSCLKSWEGNLITTYLEMKTFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFNKAMKARKELAQILEQIISTRRCKKQEYNDLLASFMDEKAGLSDEQISDNIIGVIFAARDTTASVLTWIVKYLGENPSVLESVTEEQMSIIEGKQGNGEEIGLKWEDTKNMPITSRVIQETLRVASILSFTFREATEDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLVHHLTTKYRWSVVGEKNGIQYGPFALPQNGLPINLYSKK*	468

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr4g4422	467	Gene3D	Cytochrome P450	29	466	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PANTHER	CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE	11	464	-	-
Tpr4g4422	467	PRINTS	P450 superfamily signature	276	293	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	P450 superfamily signature	335	346	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	P450 superfamily signature	406	415	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	P450 superfamily signature	415	426	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	E-class P450 group I signature	67	86	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	E-class P450 group I signature	265	282	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	E-class P450 group I signature	285	311	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g4422	467	PRINTS	E-class P450 group I signature	334	352	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g4422	Tpr-Chr4	51693772	51696724	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g4422	1	461	Cytochrome P450	AT4G19230	71.336	0.0	684

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g4422	K09843		-	gmx:100170674	801.586

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g4422	4	51693772	51696724	Tpr4g4422	4	51693772	51696724	ECH
	Tpr2g1269	2	14796865	14800015	Tpr4g4422	4	51693772	51696724	PCT

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