Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4422 ATGGAAATTACTACTTTGTTTTTGTATTTTGCTTCTTTTCTCTTCATTGTTCTGTTCAAATCACTCATCAAATCTTTCTTATTTCCTTCCAAAAATGGAAAACAATTGCCACTCCCTCCTGGCTCTATGGGTTACCCTTACATAGGAGAGACTTTTCAAATGTATTCTCAAGATCCTAGTCTTTTCTTTGCCAACAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCAGCAAAATTTGTGTTAAACAAAGCTCAATTATTCAAACCAACATTTCCAGCTAGCAAAGAAAGGATGTTAGGAAAACAAGCAATTTTCTTTCATCAAGGAAATTACCATGCTAACCTTAGAAGACTTGTTCTTCGTACCTTCATGCCTGAAGCCATCAAAAGCATTGTTCCTAATATTGAATCCATTGCTCAAAGTTGTCTCAAATCATGGGAGGGAAATTTAATCACCACTTATCTTGAAATGAAAACATTCACCTTCAACGTAGCACTTCTATCAATTTTTGGAAAAGATGAAATTCTATACAGAGAAGATCTTAAAAGATGCTACTACACACTTGAAAAAGGGTACAATTCAATGCCAATAAACCTTCCAGGAACACTTTTCAACAAAGCTATGAAAGCAAGAAAAGAGCTTGCACAAATCTTAGAACAAATAATCTCAACAAGGAGGTGCAAAAAGCAAGAATACAATGATTTATTAGCTTCATTCATGGATGAAAAAGCAGGACTAAGTGATGAACAAATATCAGATAATATCATTGGTGTTATTTTTGCTGCTAGAGATACAACTGCTAGTGTGCTGACGTGGATTGTTAAGTACCTTGGTGAAAATCCTAGTGTCCTTGAATCAGTCACAGAAGAACAAATGTCTATAATTGAGGGAAAACAAGGAAATGGTGAAGAAATTGGTCTAAAATGGGAAGACACAAAAAATATGCCAATAACTTCAAGGGTCATACAAGAGACTCTTAGAGTAGCATCAATTTTGTCTTTTACTTTCAGAGAAGCAACTGAAGATGTTGAATATCAAGGGTATCTTATACCAAAAGGATGGAAAGTATTGCCACTTTTCAGAAATATACATCATAGTCCAGAAAATTTCAAAGAGCCAGAAAAATTTGATCCTTCAAGATTTGAGGTTGCTCCTAAACCTAATACTTTCATGCCATTTGGAAATGGGACCCATGCTTGTCCTGGCAATGAATTAGCAAAGTTAGAGATTTTGGTTCTTGTACATCATCTAACCACAAAGTACAGATGGTCAGTGGTCGGTGAAAAAAATGGAATTCAATATGGTCCTTTTGCTCTTCCACAAAATGGTTTACCAATCAACTTATATTCCAAGAAATAG 1404 0.3504 MEITTLFLYFASFLFIVLFKSLIKSFLFPSKNGKQLPLPPGSMGYPYIGETFQMYSQDPSLFFANKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGNYHANLRRLVLRTFMPEAIKSIVPNIESIAQSCLKSWEGNLITTYLEMKTFTFNVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFNKAMKARKELAQILEQIISTRRCKKQEYNDLLASFMDEKAGLSDEQISDNIIGVIFAARDTTASVLTWIVKYLGENPSVLESVTEEQMSIIEGKQGNGEEIGLKWEDTKNMPITSRVIQETLRVASILSFTFREATEDVEYQGYLIPKGWKVLPLFRNIHHSPENFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNELAKLEILVLVHHLTTKYRWSVVGEKNGIQYGPFALPQNGLPINLYSKK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4422 467 Gene3D Cytochrome P450 29 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 464 - -
Tpr4g4422 467 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS P450 superfamily signature 406 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS P450 superfamily signature 415 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 285 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 334 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 374 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 PANTHER CYTOCHROME P450 26 11 464 - -
Tpr4g4422 467 Pfam Cytochrome P450 39 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 SUPERFAMILY Cytochrome P450 35 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4422 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4422 Tpr-Chr4 51693772 51696724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4422 1 461 Cytochrome P450 AT4G19230 71.336 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4422 K09843 - gmx:100170674 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4422 4 51693772 51696724 Tpr4g4422 4 51693772 51696724 ECH
Tpr2g1269 2 14796865 14800015 Tpr4g4422 4 51693772 51696724 PCT