Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4418 ATGGTAGCAGGAAATGGTGATATATGGAAAGCTCATACGGCTATGGCAATCGTCCAGTTATTCACCGGTGGTTATCACGTTATTACAAAATTAGCTCTTAATGTTGGAGTCAACCAAATTGTTTTTTGTGTTTTTCGTGATCTTCTTGCTCTCTCTATTCTCGCTCCCATCGCTTTTTTTCGTGAAAGACGTACACGGCCGCCCCTAACCAAACGCTTTGTAACATCATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAATCATCTTTTGTTTCTTATTGGTTTGAGCTATACTAATCCAACTTATGCTGCTGCAATTCAGCCAGCTACTCCAGTCTTTACATTTGTTTTGGCTATCATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTCTGGCCAAGGTTGGAGGAATTTTTGTCTGTGTTTTGGGTGCCTTGGTGATGGTTTTGTACCGTGGTCCAGCACTGATAGGATATTCAGAAATGGACCTTATATCGCACAGTGAAATAAGTGCAAGAGGTCAACCAGAGCCTTCTGGATGGTTAGTTAGTGGTTTAATGGAACTTGGATTAGACCATTTTCATGTTGGGGTTTTGTGCTTAATAGGAAACTGCATGTGCATGGCTACTTTTCTATCAATTCAGGCTCCGTTATTAAAAAAGTATCCTGCAAACCTATCTGTCGCAGCGTATTCTTACTTCTTTGGAGCTTTACTGATGGTAACTACATCATACTTTGTGACCGATGAGTCAACTGATTGGCGTTTGACACAGTCTGAAACATTTGCCGTTTTATATGCTGGGATTATTGCATCTGCTCTTAATTATGGAATCATTACATGGAGCAACAAGATCTTGGGCCCAGCCATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCGGCGGCTCTCCTGTCTAGAATTTTTATTGGAAGTCCAATTTACATGGGAAGTGTCTTAGGTGGATCTCTGATCATTACTGGTCTGTATGCGGTTACTTGGGCATCATATAGAGAAAGACAGGCAGCTGCTGGAGTTATTTCTCATCATGTCTCTAAATGGGAATCACTTCGCAAGACTTCGTTTCCCAGAATTAATATTTTCTCTGGCTCCCCAAAGCCTTCGGATTGA 1140 0.414 MVAGNGDIWKAHTAMAIVQLFTGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPIAFFRERRTRPPLTKRFVTSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFVLAIMMGTERVNLLRYEGLAKVGGIFVCVLGALVMVLYRGPALIGYSEMDLISHSEISARGQPEPSGWLVSGLMELGLDHFHVGVLCLIGNCMCMATFLSIQAPLLKKYPANLSVAAYSYFFGALLMVTTSYFVTDESTDWRLTQSETFAVLYAGIIASALNYGIITWSNKILGPAMVALYNPLQPGAAALLSRIFIGSPIYMGSVLGGSLIITGLYAVTWASYRERQAAAGVISHHVSKWESLRKTSFPRINIFSGSPKPSD* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4418 379 PANTHER WAT1-RELATED PROTEIN 10 359 - -
Tpr4g4418 379 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Tpr4g4418 379 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020|GO:0016021
Tpr4g4418 379 PANTHER WAT1-RELATED PROTEIN 10 359 IPR030184 GO:0016021|GO:0022857
Tpr4g4418 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 341 - -
Tpr4g4418 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4418 Tpr-Chr4 51621008 51626195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4418 94 344 Nodulin-like Gene Family AT5G45370 67.729 4.06e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4418 - - gmx:100809051 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4418 4 51621008 51626195 Tpr4g4418 4 51621008 51626195 ECH
Tpr2g1254 2 14636856 14641504 Tpr4g4418 4 51621008 51626195 PCT