LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g4417	ATGGTCTTTGGCAAAACCTCCGGCGCCAAAAGCAATCTCCGAATCTCATCTTCTCTTCAAGATCTCACCTCTTACCGTCACCTCGATCCACAAAATCCAATCTCAACCGTCAATTCAATCAACCAACAACAACAACAACAACTGCAACAACAACAACAACAACTTCTTCAGAACTCAACTTTCTCCAAAACAAAACCAACCCAAATTCCAAACCCGACCCGTAAAAAATGTTGCAAACCCATCACACTCATCTTATGCTTCCTCATCTTCATTCTCCTCATATACGTAATTTCAACACTCGTTTATTCTCATCGAAATTCAGGTAAGTACTACGTCGTTTTGGATTGTGGTAGTACTGGAACTCGTGTTTACGTTTACAAAGCTGAAATTGAACAAAAATCACAAGATAGTTCGATTCCGATTTCGGTTACTTCGTTGAGAAACGGTTTACAGAAAAAACGCGGTTCACAAAGTGGTCGTGCTTATGATAGAATGGAAACTGAACCGGGTCTTGATAAACTGGTTCATAATGTAACTGGTTTAAAAACTGCTTTGAAACCGCTTCTTAAATGGGCTATGAAACAGATTCCAGAAAATTATCATAAAAGCACTTCGCTTTTTCTTTATGCTACTGCTGGTGTTAGAAGGTTACCAAATGAGGATTCAAAATGGTTACTTGATAATGCTTGGAATGTTCTTAAAGGTTCGAGTTTTGTTTGTAGGAAAGATTGGGTTAAGATTATTAGTGGGACTGAAGAAGCTTATTTTGGGTGGATTGCATTGAATTATGATAGTGGTATTTTGGGTGTTAAACCTAGGAAAGAGACTTATGGTGCACTTGATTTAGGTGGGTCTTCTTTGCAGGTTACTTTTGAAGGTGATCAAAATTTGAATAGTGAAACTAGTTTGTTTGTTAGGATTGGTTCGGTTAATCATCATTTAACTGCTTATTCTTTAGCTGGGTATGGTCTTAATGAAGCTTTTGATAAATCTGTTGCTTATGTTTTTAAGAAAAATAAACTTGGTTTAGGTGGGACTGTTAAACATCCTTGTTTGCAAAATGGGTATAAGAGTCAATATACGTGTTCTCGTTGTTTGGCTGTTGAGAAAGAAAAGGAAGTGGAGAGTCCTAAAGTAGTTAATGGGAGTGTCAATGCTGTTGGTGGTGGAAAAGGAGTGTTGAAAACGCCGGTGAGGCTTATTGGTGCGCCCAATTGGCAAGAGTGTAGTGCCATTGCTAAGGTTGCTGTTAATTTGTCTGAATGGTCTGATGTTGATCAAGGTCTTGATTGTGAAGTGAATCCTTGTGCTTTGCGCGAGAATCTTCCTCGCCCGTTAGGTCATTTTTATGTGATTTCTGGATTTTTCGTGGTGTATAGGTTTTTCAATTTGACTTCTGAGGCTACTATTGATGATGTGTTGGAAAAGGGTAGGGAATTTTGTGAAAAAAAATGGGATGTTGCTAAGAAAAGTGTTGCTCCACAGCCTTTTATCGAGCAATATTGTTTCAGGGCACCTTATGTTGCTTCTTTGCTGAGAGAGGGTTTGCATATTACTGATAGACATATAACTGTTGGCTCTGGAAGCATTACTTGGACACTTGGGGTGGCTCTGTTGGAAGCTGGGAAGTCTTATTCGACCAGATTTGGTCTTCAGGGATTTGACTTGGTTCAGATGAAGATGAATCCTCTGATTCTTATTCCCATTTTGTTACTTTCTCTTATTCTTTTATGTTGCGCTTTATCATGTGTCCTCAAATGGATGCCAAGATTTTTCCGGAGGCAATATCTTCCCCTTTTCAGGCATAACAACCCGTCCAGTGCATCTGTTCTTAAGTCTCCTTTATGGTTCAAGAGTTGGAGTCCAATTATTTCTGGAGAGTCAAGAATAAAGACACCACTCAGCCCAACAACAATCATAGGTTCACAAGATAGACCATTTAGCTTGGGACATGGCCTTGGTGATAACAGTGGCGGCATCCAGTTGATGGAATCTTCTTTTTACCCGACAGCTAGTGGTGTCTCACACAGTTATTCCTCTGCCAATTTAGGGCAGATGCCATTTGAGAGTAATAATACAGGGACCTTTTGGCCGCCCCACAGAAGTCAGATGCGTCTGCAGAGTAGAAGATCACAATCTCGAGATGACTTGATTTCGTCAGTGGCTGATGCACACATGGTGAATGTTTAG	2190	0.3995	MVFGKTSGAKSNLRISSSLQDLTSYRHLDPQNPISTVNSINQQQQQQLQQQQQQLLQNSTFSKTKPTQIPNPTRKKCCKPITLILCFLIFILLIYVISTLVYSHRNSGKYYVVLDCGSTGTRVYVYKAEIEQKSQDSSIPISVTSLRNGLQKKRGSQSGRAYDRMETEPGLDKLVHNVTGLKTALKPLLKWAMKQIPENYHKSTSLFLYATAGVRRLPNEDSKWLLDNAWNVLKGSSFVCRKDWVKIISGTEEAYFGWIALNYDSGILGVKPRKETYGALDLGGSSLQVTFEGDQNLNSETSLFVRIGSVNHHLTAYSLAGYGLNEAFDKSVAYVFKKNKLGLGGTVKHPCLQNGYKSQYTCSRCLAVEKEKEVESPKVVNGSVNAVGGGKGVLKTPVRLIGAPNWQECSAIAKVAVNLSEWSDVDQGLDCEVNPCALRENLPRPLGHFYVISGFFVVYRFFNLTSEATIDDVLEKGREFCEKKWDVAKKSVAPQPFIEQYCFRAPYVASLLREGLHITDRHITVGSGSITWTLGVALLEAGKSYSTRFGLQGFDLVQMKMNPLILIPILLLSLILLCCALSCVLKWMPRFFRRQYLPLFRHNNPSSASVLKSPLWFKSWSPIISGESRIKTPLSPTTIIGSQDRPFSLGHGLGDNSGGIQLMESSFYPTASGVSHSYSSANLGQMPFESNNTGTFWPPHRSQMRLQSRRSQSRDDLISSVADAHMVNV*	730

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr4g4417	729	PANTHER	GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN	42	701	-	-
	Tpr4g4417	729	Pfam	GDA1/CD39 (nucleoside phosphatase) family	105	540	IPR000407	GO:0016787
	Tpr4g4417	729	Gene3D	Exopolyphosphatase. Domain 2	250	527	-	-
	Tpr4g4417	729	PANTHER	ADENOSINE/GUANOSINE DIPHOSPHATASE	42	701	IPR000407	GO:0016787
	Tpr4g4417	729	Coils	Coil	34	54	-	-
	Tpr4g4417	729	Gene3D	-	101	249	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g4417	Tpr-Chr4	51608492	51617064	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g4417	8	729	Nodulin-like Gene Family	AT4G19180	55.962	0.0	768

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g4417	-		-	lja:Lj0g3v0174799.1	997.653

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr2g1250	2	14619239	14623780	Tpr4g4417	4	51608492	51617064	PCT

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