Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4417 ATGGTCTTTGGCAAAACCTCCGGCGCCAAAAGCAATCTCCGAATCTCATCTTCTCTTCAAGATCTCACCTCTTACCGTCACCTCGATCCACAAAATCCAATCTCAACCGTCAATTCAATCAACCAACAACAACAACAACAACTGCAACAACAACAACAACAACTTCTTCAGAACTCAACTTTCTCCAAAACAAAACCAACCCAAATTCCAAACCCGACCCGTAAAAAATGTTGCAAACCCATCACACTCATCTTATGCTTCCTCATCTTCATTCTCCTCATATACGTAATTTCAACACTCGTTTATTCTCATCGAAATTCAGGTAAGTACTACGTCGTTTTGGATTGTGGTAGTACTGGAACTCGTGTTTACGTTTACAAAGCTGAAATTGAACAAAAATCACAAGATAGTTCGATTCCGATTTCGGTTACTTCGTTGAGAAACGGTTTACAGAAAAAACGCGGTTCACAAAGTGGTCGTGCTTATGATAGAATGGAAACTGAACCGGGTCTTGATAAACTGGTTCATAATGTAACTGGTTTAAAAACTGCTTTGAAACCGCTTCTTAAATGGGCTATGAAACAGATTCCAGAAAATTATCATAAAAGCACTTCGCTTTTTCTTTATGCTACTGCTGGTGTTAGAAGGTTACCAAATGAGGATTCAAAATGGTTACTTGATAATGCTTGGAATGTTCTTAAAGGTTCGAGTTTTGTTTGTAGGAAAGATTGGGTTAAGATTATTAGTGGGACTGAAGAAGCTTATTTTGGGTGGATTGCATTGAATTATGATAGTGGTATTTTGGGTGTTAAACCTAGGAAAGAGACTTATGGTGCACTTGATTTAGGTGGGTCTTCTTTGCAGGTTACTTTTGAAGGTGATCAAAATTTGAATAGTGAAACTAGTTTGTTTGTTAGGATTGGTTCGGTTAATCATCATTTAACTGCTTATTCTTTAGCTGGGTATGGTCTTAATGAAGCTTTTGATAAATCTGTTGCTTATGTTTTTAAGAAAAATAAACTTGGTTTAGGTGGGACTGTTAAACATCCTTGTTTGCAAAATGGGTATAAGAGTCAATATACGTGTTCTCGTTGTTTGGCTGTTGAGAAAGAAAAGGAAGTGGAGAGTCCTAAAGTAGTTAATGGGAGTGTCAATGCTGTTGGTGGTGGAAAAGGAGTGTTGAAAACGCCGGTGAGGCTTATTGGTGCGCCCAATTGGCAAGAGTGTAGTGCCATTGCTAAGGTTGCTGTTAATTTGTCTGAATGGTCTGATGTTGATCAAGGTCTTGATTGTGAAGTGAATCCTTGTGCTTTGCGCGAGAATCTTCCTCGCCCGTTAGGTCATTTTTATGTGATTTCTGGATTTTTCGTGGTGTATAGGTTTTTCAATTTGACTTCTGAGGCTACTATTGATGATGTGTTGGAAAAGGGTAGGGAATTTTGTGAAAAAAAATGGGATGTTGCTAAGAAAAGTGTTGCTCCACAGCCTTTTATCGAGCAATATTGTTTCAGGGCACCTTATGTTGCTTCTTTGCTGAGAGAGGGTTTGCATATTACTGATAGACATATAACTGTTGGCTCTGGAAGCATTACTTGGACACTTGGGGTGGCTCTGTTGGAAGCTGGGAAGTCTTATTCGACCAGATTTGGTCTTCAGGGATTTGACTTGGTTCAGATGAAGATGAATCCTCTGATTCTTATTCCCATTTTGTTACTTTCTCTTATTCTTTTATGTTGCGCTTTATCATGTGTCCTCAAATGGATGCCAAGATTTTTCCGGAGGCAATATCTTCCCCTTTTCAGGCATAACAACCCGTCCAGTGCATCTGTTCTTAAGTCTCCTTTATGGTTCAAGAGTTGGAGTCCAATTATTTCTGGAGAGTCAAGAATAAAGACACCACTCAGCCCAACAACAATCATAGGTTCACAAGATAGACCATTTAGCTTGGGACATGGCCTTGGTGATAACAGTGGCGGCATCCAGTTGATGGAATCTTCTTTTTACCCGACAGCTAGTGGTGTCTCACACAGTTATTCCTCTGCCAATTTAGGGCAGATGCCATTTGAGAGTAATAATACAGGGACCTTTTGGCCGCCCCACAGAAGTCAGATGCGTCTGCAGAGTAGAAGATCACAATCTCGAGATGACTTGATTTCGTCAGTGGCTGATGCACACATGGTGAATGTTTAG 2190 0.3995 MVFGKTSGAKSNLRISSSLQDLTSYRHLDPQNPISTVNSINQQQQQQLQQQQQQLLQNSTFSKTKPTQIPNPTRKKCCKPITLILCFLIFILLIYVISTLVYSHRNSGKYYVVLDCGSTGTRVYVYKAEIEQKSQDSSIPISVTSLRNGLQKKRGSQSGRAYDRMETEPGLDKLVHNVTGLKTALKPLLKWAMKQIPENYHKSTSLFLYATAGVRRLPNEDSKWLLDNAWNVLKGSSFVCRKDWVKIISGTEEAYFGWIALNYDSGILGVKPRKETYGALDLGGSSLQVTFEGDQNLNSETSLFVRIGSVNHHLTAYSLAGYGLNEAFDKSVAYVFKKNKLGLGGTVKHPCLQNGYKSQYTCSRCLAVEKEKEVESPKVVNGSVNAVGGGKGVLKTPVRLIGAPNWQECSAIAKVAVNLSEWSDVDQGLDCEVNPCALRENLPRPLGHFYVISGFFVVYRFFNLTSEATIDDVLEKGREFCEKKWDVAKKSVAPQPFIEQYCFRAPYVASLLREGLHITDRHITVGSGSITWTLGVALLEAGKSYSTRFGLQGFDLVQMKMNPLILIPILLLSLILLCCALSCVLKWMPRFFRRQYLPLFRHNNPSSASVLKSPLWFKSWSPIISGESRIKTPLSPTTIIGSQDRPFSLGHGLGDNSGGIQLMESSFYPTASGVSHSYSSANLGQMPFESNNTGTFWPPHRSQMRLQSRRSQSRDDLISSVADAHMVNV* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4417 729 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 42 701 - -
Tpr4g4417 729 Pfam GDA1/CD39 (nucleoside phosphatase) family 105 540 IPR000407 GO:0016787
Tpr4g4417 729 Gene3D Exopolyphosphatase. Domain 2 250 527 - -
Tpr4g4417 729 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 42 701 IPR000407 GO:0016787
Tpr4g4417 729 Coils Coil 34 54 - -
Tpr4g4417 729 Gene3D - 101 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4417 Tpr-Chr4 51608492 51617064 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4417 8 729 Nodulin-like Gene Family AT4G19180 55.962 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4417 - - lja:Lj0g3v0174799.1 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1250 2 14619239 14623780 Tpr4g4417 4 51608492 51617064 PCT