Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4414 ATGATCATTGATATGCCAGCATCCATGGCTGAAAATACTAGGAACAACTATGCTGCTGCTAACAATGCTGATGATTATGATAGTGATAGGTCAAATTTGGCACCACGCACACCATCAACTCTGTCTATGGCTGTTCCAGCTGAACTCGCTGGAGCTATACCCTTGATCGACAAATTTCAGGTGGATGGATTTTTAAAGCTGATGCATAAACAAATTCAATCTTCTGGAAAACGTGGATTTTTTTCTAAAAGATCTTCAGATCCCCAAGCTCGTGAAAAATTTACATTTGAGGACATGCTGTCTTTTCAAAAGGATCCAATACCAACTGCATTGCTTAAGATTAATGGCGATTTAGTAAGTCGGGCGACAAAATTATTCCAGATAATTTTGAAGTATACTGGAGTTGATTCATCCGATTGTGCCACTCCATTAAGCTTAGATGAACGAGTTGAGCTTGTTGGGAAACTATATAAGCAAAGTTTGAAACGTGCAGAACTCCGCGATGAGCTTTTTGTTCAGATATCAAAACAAACAAGAAACAACCCTGACAGGCAATACTTGATCAAAGCATGGGAGCTTATGTATGTATGTGCATCCTCCATGTCTCCTAGCAAAGACATTGCGGTTTATCTGTCAGAATACATTCAGAACATAGCACATGGTGTAGCAACTGATTCTGAGATCCAAACCCTTGCACTAAATACGTTGAATGCTTTGAAGCGTTCTGTTAAGGCTGGCCCTAGACATATAATACCTGGGCGAGAGGAGATTGAAGCTTTGTTGACTGGGAGAAAGCTTACAAATATAGTGTTCTTCTTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACAACAGTTGCCGACGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCGGTTTACTCTAGCTTTAGTTTGTTTGAATATCGTAAAGTTGTTACAAGTTCCAAATCATCTGATCCTGAGGAGTACATCGGGATAGATGATAACAAATATATTGGGGATCTTCTGGAGGAATTTAAAGCAGCAAAAGATCGAAGTAAGGGAGAAATCTTGCACTGTAAACTGGTATTCAAGAAAAAGCTATTTCGTGAGTCAGATGAAGCTGTGACGGATCCAATGTTTCTGCAGTTGTCCTATGTACAATTGCAACATGATTATATTTTGGGTAATTACCCTGTTGGAAAAGATGATGCTGCTCAGCTTTCTGCATTACAAATCTTGGCTGAGATTGGATCTGTTAGCACACCCGAAACATGCGCTAACTGGAATTCACATCTGGAGCGATTCCTTCCTAGACAACTTTCAATGACACGAGCAAAACGTGAATGGGAGTTTGATATTATATCTCGATATCATTCATTGGAGCATCTGACAAAAGATGACGCAAGACAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGGTATTCTGTTTTTTTCAACGTTCGCAAAATTGATGATCCTATTGGTCTCTTGCCTGGACGAATAATAATTGGAATCAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTCGGAAGCAGCAACACTGCAGTCTTTTTTAAAATGCGAGTAGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGGGAAGAAATTTGCGTAGCTCTTCAGACACATATAAACGATGTAATGCTGCGGCGCTATTCGAAAGCACGGTCTTCTAGTGGTGGTAGTTCTTTGAATGGAGATGTTTCTAATAATTCAAAGCCTCCTAATTTAGAATCACATGAGAAACGCATTCAAGATTTATCAAAACTTGTTGAAGAATCTCAAAGAAATGCTGATCAATTGAATAAAGAATTGCGTGAGAAGCAAGAACAGGAAGAAAAAATGCAAGAACAATTAGAGGGTTTGAAGGAATCCTTAAAAGCTAACGAGCAAAATCTTAAGGCCGTTACAAGTGACTGCGAAAGGCTTAGGTCATTATGCAATAAAAAAGATCAGGCGCTACAGGTTATAGGGAACAATTCAAAAAAGGATCTTGTTGAAACAAATAACCAAGTACTACAAAAGCTTAAATATGAGCTAAAAAATTGTAAAGATGAACTGTTTTCAGCCGAACAAACTATCAAAACCTTGACAAGTGAAAAAATGATTTTGGAACAGAAGCTATCTGTGCTTGAGAAGAGGAACACTGAAGAGAGTAGTTCCCTTCAACGGAAATTTGAGCAAGAGCGCAAAGCTGTGAAGTCTGAAGTATACAACCTTGAAAGAAAGCTAGAAGGGTATAGACAAGAATTAATGACTGCTAAGTCTATTATTTCAGTCAAGGACACCGAGTTGGCTGCATTGCAAAATAATTTCAAGGAATTGGAAGAATTGCGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAGACAGCTGCCATATTGAAGATGCAAGGGGCTCAGCTAGCCGAAATGGAAGCTCTTTATAAGGAAGAACAAGTTTTAAGGAAGCGTTATTTTAATGTAATAGAAGACATGAAAGGCAAGATTCGAGTTTATTGTCGGCTAAGACCTCTCAGTGAAAAAGAGATTCTTGAGAAGGAAAGAGAAGCCGTTACTGCAGCTGACGAGTTTACTGTGGAGTTTCTATGGAAAGATGATAAGCCGAAGCAGTACATATATGATCGTGTTTTTGGCAGTGATGCAAGTCAAGAAAGTGTATTTGAGGATACCAGGTATTTGGTGCAATCTGCTGTAGATGGTTTTAATGTGTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACGTTTACAATCTATGGATCTGAAGATAATCATGGGCTTACCCCTCGTGCAATTGGTGAACTTTTTAGAATTTTACAGAGAGATGGTAAAAAGTATTCCTTTTCATTGAAGGCATACATGGTCGAATTATATCAAGATACCCTAATAGATCTTCTGTTAACTAGGAATGCAAAGCATTCAAGATTAGATATCAAGAAGGATTCAACGGGAATGGTTGTTGTGGAAAATGTGACGGTGATGTCAATTTCTACAATTGAAGAATTGAATAATATAATACAAAAGGGATCTGAACGTCGACATATATCAGGGACACAAATGAATGAAGAAAGTTCAAGATCTCATCTCATTCTTTCAATAGTAATTGAAAGCACCAACCTTCAAAGCCAATCAGTTGCAAGGGGAAAGCTGAGTTTTGTTGATCTTGCCGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTATGGGTAGTCAGCTGAAGGAAGCACAGAGTATTAACAAATCATTATCAGCACTTGGAGATGTTATAAGTGCTTTGTCTTCTGGCGGTCAACACACACCTTATAGGAATCACAAGTTAACAATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTCAATGTTTCTCCAATAGAATCAAGCTTGGATGAGACTCATAACTCTCTCACGTACGCTTCAAGAGTGAGATCAATTGTGAACGACCCTAACAAAAATGTTAGTTCAAAAGAAGTAGCGCGATTAAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGCAGAGGAATTGAGTATGAAGATTTAGAAGAAATTCAAGAAGAACGATCACCTAAAGGTAGACCAGATAGTCATGGTAGCTCTAGATCTAGTCTAGGTGGTAAATAG 3720 0.3844 MIIDMPASMAENTRNNYAAANNADDYDSDRSNLAPRTPSTLSMAVPAELAGAIPLIDKFQVDGFLKLMHKQIQSSGKRGFFSKRSSDPQAREKFTFEDMLSFQKDPIPTALLKINGDLVSRATKLFQIILKYTGVDSSDCATPLSLDERVELVGKLYKQSLKRAELRDELFVQISKQTRNNPDRQYLIKAWELMYVCASSMSPSKDIAVYLSEYIQNIAHGVATDSEIQTLALNTLNALKRSVKAGPRHIIPGREEIEALLTGRKLTNIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSVYSSFSLFEYRKVVTSSKSSDPEEYIGIDDNKYIGDLLEEFKAAKDRSKGEILHCKLVFKKKLFRESDEAVTDPMFLQLSYVQLQHDYILGNYPVGKDDAAQLSALQILAEIGSVSTPETCANWNSHLERFLPRQLSMTRAKREWEFDIISRYHSLEHLTKDDARQQFLRILRALPYGYSVFFNVRKIDDPIGLLPGRIIIGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSSSGGSSLNGDVSNNSKPPNLESHEKRIQDLSKLVEESQRNADQLNKELREKQEQEEKMQEQLEGLKESLKANEQNLKAVTSDCERLRSLCNKKDQALQVIGNNSKKDLVETNNQVLQKLKYELKNCKDELFSAEQTIKTLTSEKMILEQKLSVLEKRNTEESSSLQRKFEQERKAVKSEVYNLERKLEGYRQELMTAKSIISVKDTELAALQNNFKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMEALYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEILEKEREAVTAADEFTVEFLWKDDKPKQYIYDRVFGSDASQESVFEDTRYLVQSAVDGFNVCIFAYGQTGSGKTFTIYGSEDNHGLTPRAIGELFRILQRDGKKYSFSLKAYMVELYQDTLIDLLLTRNAKHSRLDIKKDSTGMVVVENVTVMSISTIEELNNIIQKGSERRHISGTQMNEESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSMGSQLKEAQSINKSLSALGDVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPIESSLDETHNSLTYASRVRSIVNDPNKNVSSKEVARLKKLVAYWKQQAGRGIEYEDLEEIQEERSPKGRPDSHGSSRSSLGGK* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4414 1239 CDD FERM_C_KCBP 482 582 - -
Tpr4g4414 1239 Gene3D Kinesin motor domain 798 1178 IPR036961 -
Tpr4g4414 1239 Coils Coil 784 821 - -
Tpr4g4414 1239 CDD FERM_B-lobe 379 477 IPR019748 -
Tpr4g4414 1239 ProSitePatterns Kinesin motor domain signature. 1077 1088 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr4g4414 1239 SMART B41_5 262 484 IPR019749 -
Tpr4g4414 1239 PANTHER KINESIN-RELATED 583 1224 IPR027640 GO:0003777|GO:0007018
Tpr4g4414 1239 MobiDBLite consensus disorder prediction 584 605 - -
Tpr4g4414 1239 ProSiteProfiles FERM domain profile. 266 578 IPR000299 GO:0005856
Tpr4g4414 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1203 IPR027417 -
Tpr4g4414 1239 Gene3D - 1180 1228 - -
Tpr4g4414 1239 MobiDBLite consensus disorder prediction 1210 1227 - -
Tpr4g4414 1239 SUPERFAMILY Prismane protein-like 799 860 IPR011254 GO:0003824|GO:0016491
Tpr4g4414 1239 Pfam Kinesin motor domain 862 1177 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 SUPERFAMILY Second domain of FERM 362 479 IPR035963 -
Tpr4g4414 1239 SUPERFAMILY PH domain-like 484 572 - -
Tpr4g4414 1239 Pfam MyTH4 domain 155 259 IPR000857 GO:0005856
Tpr4g4414 1239 Gene3D MyTH4 domain 80 263 IPR038185 -
Tpr4g4414 1239 ProSiteProfiles MyTH4 domain profile. 102 261 IPR000857 GO:0005856
Tpr4g4414 1239 PRINTS Kinesin heavy chain signature 928 949 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 PRINTS Kinesin heavy chain signature 1047 1064 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 PRINTS Kinesin heavy chain signature 1078 1096 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 PRINTS Kinesin heavy chain signature 1127 1148 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 583 1224 - -
Tpr4g4414 1239 Coils Coil 603 672 - -
Tpr4g4414 1239 SMART kinesin_4 854 1185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 CDD KISc_C_terminal 854 1179 - -
Tpr4g4414 1239 MobiDBLite consensus disorder prediction 1210 1239 - -
Tpr4g4414 1239 Gene3D - 376 477 IPR014352 -
Tpr4g4414 1239 Coils Coil 692 740 - -
Tpr4g4414 1239 ProSiteProfiles Kinesin motor domain profile. 856 1177 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr4g4414 1239 Gene3D - 265 367 - -
Tpr4g4414 1239 Gene3D - 482 590 IPR011993 -
Tpr4g4414 1239 Pfam FERM central domain 370 484 IPR019748 -
Tpr4g4414 1239 SMART MyTH4_1 102 261 IPR000857 GO:0005856
Tpr4g4414 1239 Coils Coil 749 776 - -
Tpr4g4414 1239 MobiDBLite consensus disorder prediction 584 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4414 Tpr-Chr4 51566219 51574685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4414 41 1228 Calmodulin-binding Proteins AT5G65930 72.149 0.0 1752
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4414 4 51566219 51574685 Tpr4g4414 4 51566219 51574685 ECH
Tpr2g1242 2 14556858 14564333 Tpr4g4414 4 51566219 51574685 PCT