Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4413 ATGTCTTCTTCTGGTTATTCTATGAACACTGTTTTGTTTTCTCTGTTTCTGTTTGTGCTTGTTCCAAAAGTTAGCTTTTGCTTTTCTACCAAGGTTTATGTAGTTTACATGGGAAGCAAAAGTTGGGAACACCCAGATGAAATTTTGAAGGAAAATCATCAAATACTTGCTTCTGTTCATAGTGGAAGCATTGAAGAAGCACAAGCTTCTCATGTTTATAGCTATAAACATGGTTTCAGAGGCTTTGCAGCTAAGCTCAGTGATGAACAGGCTTCCCAAATTTCTAAAATGGCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAATGCTGCACACAACTCATTCATGGGATTTCATGGGAGTTTTGGATGACCAAACCATGGAAACACTTGGCTACTCTATTACGAACCAAGAAAATATCATCATCGGTTTCATTGATACCGGAATTTGGCCAGAATCTCCAAGTTTCAGTGACACTGACATGCCTGAAGTCCCACAAGGGTGGAAGGGTCTATGTCAATCAGGAGAAGAATTCAATGCTTCAACTTGCAACAGGAAAGTGATAGGAGCAAGATACTATTTGAGTGGATATGAAGCAGAAGAAGAGTCACATGCAAAAGTGTCATTCAAATCAGCTAGGGACAGCGCCGGTCACGGTAGCCATACAGCTTCTATAGCGGCAGGGAGATATGTACAGAACATGAATTATAAAGGATTAGCAAGTGGAGGTGCAAGAGGAGGTGCTCCTATGGCTAGGATTGCTGTATACAAATCATGTTGGGATTCAGGTTGCTATGATGTTGACTTGTTAGCTGCATTTGATGATGCTATAAGAGATGGTGTTAACATTTTGTCTCTATCGCTTGGTGCTCAATCACCACAAGGAGATTATTTCAATGATGCTATATCTATAGGGTCGTTTCATGCCGCCAAACGTGGAGTGCTTGTTGTTTCATCAGCTGGAAATGAAGGAAATCCTGGTTCTGCTACTAATCTTGCACCATGGATGCTTACCGTTGCTGCTAGCTCCACTGATAGGGATTTCATTTCTGATATCATATTAGGAAATGGTGCTAATATCACGGGTGAAAGTCTAAGTCTCTTTGAAATGAATGCATCCTCAAGAATAATTTCAGCTTCTGAAGCATTTGCAGGATACTTCACTCCTTATCAATCCAGTTACTGTTTAGAGAGTTCTTTGAATAAAACAAAGACCAAAGGGAAGATTCTAGTTTGTAGACATGTAGGGAGGTCAACAGAATTAAAGGTGAAAAAGAGCAAGATAGTAAAAGAAGCAGGTGGAGTTGGCATGATACTTATTGATGAGACCGATCAAGATGTTGCTGTGCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAAAAGGAGAAAAGATTCTATCGTACATCAAGACTACGCGTAAACCTATGTCAAGGATATTAGGAGCAAAGACAGTAATAGGAGCTCGACCTGCACCACGTGTAGCTGCATTTTCTTCCAGAGGTCCTAATGTTTTAAACCCTGAAATTTTGAAGCCTGATGTGACAGCTCCAGGACTAAATATTCTAGCAGCATGGTCTCCAGCAACTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCGTGTCCTCATGTAACTGGAATTGCAACCTTGGTCAAAGCTGTTCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCGATCATGACAACTGCTACAATCCTAGATAAACGGCACAGACCGATCATTGTAGATCCAGAACAAAGAAGGGCTAATGCATTTGATTATGGATCAGGATTTTTGAACCCTTTAAGAGTTCTTAACCCTGGTCTTATCTATGATTCTGAGCCAACAGATTACATTACATTCCTATGTTCACTTGGTTATGATCAAAGATCACTTCATCTTGTTACTAGAGACAACAAAACATGTACAAGCAAATTCACCACTGCATCAAATCTCAACTATCCATCCATTGCAGTTCCAAATCTCAAAGACAACTTTTCGGTTACAAGGATTGTGACAAATGTTGGAAAAGCAGCAAGTATATATAAATCTGTAGTGTCTCCACCACCTGGTGTTAATGTTACCGTTACACCGAACCGGTTAGTGTTCACAAGAATTGGACAGAAAATAAAGTTCAGTGTGAATTTCAAAGTAAGTTCTACTCCTTCAAAAGGATACAAATTTGGATTCTTGTCATGGACAAATAGAAGGTTACAAGTTACTAGTCCTTTGGTTGTAAAGGTTGGTTAG 2265 0.3978 MSSSGYSMNTVLFSLFLFVLVPKVSFCFSTKVYVVYMGSKSWEHPDEILKENHQILASVHSGSIEEAQASHVYSYKHGFRGFAAKLSDEQASQISKMAGVVSVFPNSKRMLHTTHSWDFMGVLDDQTMETLGYSITNQENIIIGFIDTGIWPESPSFSDTDMPEVPQGWKGLCQSGEEFNASTCNRKVIGARYYLSGYEAEEESHAKVSFKSARDSAGHGSHTASIAAGRYVQNMNYKGLASGGARGGAPMARIAVYKSCWDSGCYDVDLLAAFDDAIRDGVNILSLSLGAQSPQGDYFNDAISIGSFHAAKRGVLVVSSAGNEGNPGSATNLAPWMLTVAASSTDRDFISDIILGNGANITGESLSLFEMNASSRIISASEAFAGYFTPYQSSYCLESSLNKTKTKGKILVCRHVGRSTELKVKKSKIVKEAGGVGMILIDETDQDVAVPFVIPSAIVGKKKGEKILSYIKTTRKPMSRILGAKTVIGARPAPRVAAFSSRGPNVLNPEILKPDVTAPGLNILAAWSPATGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAIMTTATILDKRHRPIIVDPEQRRANAFDYGSGFLNPLRVLNPGLIYDSEPTDYITFLCSLGYDQRSLHLVTRDNKTCTSKFTTASNLNYPSIAVPNLKDNFSVTRIVTNVGKAASIYKSVVSPPPGVNVTVTPNRLVFTRIGQKIKFSVNFKVSSTPSKGYKFGFLSWTNRRLQVTSPLVVKVG* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4413 754 Gene3D Peptidase S8/S53 domain 140 623 IPR036852 GO:0004252|GO:0006508
Tpr4g4413 754 Gene3D - 346 488 - -
Tpr4g4413 754 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Tpr4g4413 754 Gene3D - 627 753 - -
Tpr4g4413 754 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Tpr4g4413 754 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 752 - -
Tpr4g4413 754 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 112 IPR037045 -
Tpr4g4413 754 Pfam Subtilase family 139 578 IPR000209 GO:0006508|GO:0008236
Tpr4g4413 754 Pfam Fibronectin type-III domain 656 751 IPR041469 -
Tpr4g4413 754 ProSiteProfiles Serine proteases, subtilase domain profile. 116 610 - -
Tpr4g4413 754 CDD Peptidases_S8_3 111 576 IPR034197 -
Tpr4g4413 754 Pfam PA domain 384 467 IPR003137 -
Tpr4g4413 754 CDD PA_subtilisin_like 352 481 - -
Tpr4g4413 754 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Tpr4g4413 754 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Tpr4g4413 754 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Tpr4g4413 754 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 752 IPR045051 -
Tpr4g4413 754 SUPERFAMILY Subtilisin-like 111 614 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4413 Tpr-Chr4 51559488 51565561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4413 33 753 Subtilisin-like Serine Gene Family AT2G04160 43.426 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4413 - - gmx:100808547 1281.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4413 4 51559488 51565561 Tpr4g4413 4 51559488 51565561 ECH
Tpr2g1239 2 14526752 14531810 Tpr4g4413 4 51559488 51565561 PCT