Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4401 ATGTCAATTGAGATAATTGATCTTACAAACACCCCTGACACCCCTCCATCAAAACCCATATCTTCATCCAATGCATCAATGATCCTTAACTTTGGTCCTGTTTCTGTCAACCCTAATCTTCACCAACATATCCATCACCACCAACACCAAACTACTTTGTTGGTACCAGTAGCTCCAACACACACCAATGAGACCCCTCAAATCGCTACCGGTTGGCCCCAACCCGGCGTTTTTCACAGCCGAGTTACAACGGTTCTTAAACCGTTACCTGAACCAAACACATCCCAATTGTCAAGTGAAATCAGACTCGGAGTTCGTTGGAGTCAACTAGAGCATGACTTATTTCTGATGGGACTGATTGAGTATGGAAAAGGGAGATGGAGCAAAATAGCTAAGCATTTTGTATGCAGCAAGACACCTCAACAAGTTCAAAACTATGCTGCAAGCTTCTTCAAGCATCTTCCACCAGCTTATGTGCATGGTTTTAAGAGAAGAAAACAAATTTCAAATCCCAATAACTCTTTTTCTAAAAGAAATAGAAATTCATCAAATTATTCAATGCCTAATATGATTCCTACAAAGCAAGCTCTCACTCTTTTACCAGCAACAGCTCCTTATCATCAAGTTGGAAAATATTATGGAGGAGAAGCTAGCACTTCCATGATGAATGATGGTGCAAGCACTTCTATGACTATTATGCCTAATGCTACTTCTACTAATGGAAAAGTTGATTTGGAACTTCGTTTGGCTTTATGTTAG 759 0.4005 MSIEIIDLTNTPDTPPSKPISSSNASMILNFGPVSVNPNLHQHIHHHQHQTTLLVPVAPTHTNETPQIATGWPQPGVFHSRVTTVLKPLPEPNTSQLSSEIRLGVRWSQLEHDLFLMGLIEYGKGRWSKIAKHFVCSKTPQQVQNYAASFFKHLPPAYVHGFKRRKQISNPNNSFSKRNRNSSNYSMPNMIPTKQALTLLPATAPYHQVGKYYGGEASTSMMNDGASTSMTIMPNATSTNGKVDLELRLALC* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4401 252 ProSiteProfiles SANT domain profile. 102 155 IPR017884 -
Tpr4g4401 252 SMART sant 103 153 IPR001005 -
Tpr4g4401 252 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g4401 252 ProSiteProfiles Myb-like domain profile. 106 151 IPR001005 -
Tpr4g4401 252 SUPERFAMILY Homeodomain-like 107 154 IPR009057 -
Tpr4g4401 252 Pfam Myb-like DNA-binding domain 106 146 IPR001005 -
Tpr4g4401 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 155 IPR017930 -
Tpr4g4401 252 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 14 249 - -
Tpr4g4401 252 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 14 249 - -
Tpr4g4401 252 Gene3D - 105 155 - -
Tpr4g4401 252 CDD SANT 106 147 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr4g4401 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4401 - - mtr:MTR_8g073050 266.929