Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4392 ATGAAACTTTTATTTCTCTTCATCTTTCTCCTCCTCTCGCTTCTCAATCAACAACACTGCTCCGTCGTCAACACCCTGTCTCGCTCACCTACATCACGTTCCATTCTCTCTCTTCCTCCTCCCAAGGCAGCAACTACAGCACTGGTTGCTGCACTAGATGGAACCATGTATTTGGTGGCCAGCCAGGAGAATGGTGCCGTGAGGGTAATATGGTCATTCTCTACAGGATCACCGATCTACAGTTCGTATCAAGCTCCAATCAATAAGGACCGTGGTAAAACAAATACATCTTCAGCACCAACTAGTGGGTTCGTGGAGTGTGGGGATGATTGGTCTTTGTACATGCACGACAAGATCCTCGGTAAAATGAGATTGTCAGAATCTATTGGAGAATTTGTACATCGTGCACCTATCATTTCAGATGACGGAACTGCTATATTTGGATACAAAGAAGACAGTCTGTTTGAAGTTGAAGCTAAAACTGGGTCGATCATTCAAATTCACGCTAAATCTGATCCTGGTAATGCTTCTGCACCTCTGAGAGATGACAGGCTGAGTGCTAAAAATATCATCACTGAAGATAATAAGGATCTTGCTGATCCTAAGAAGCTAAATTCATCACAGCCGCTGCTCATGCTTTTTAGGAAAGATTATACTCTGAAGTCTGTTAACACCAGCTCGAAAATAGTATTGTGGAATTTGACAGTAACTGAATTTGAAGCTGTATTATTATGCCAACACACTACAGTTGATGTAGAGGATGAAATTCCTTCTGACAGGGGCCTCAATTTTGCGATGCCTTACCCATGTCAAGAGATGCAAAACGTCTTTCGCCTGAAAAAGAATTTTCTGTTAGAACCTTTAATCACTGAAAGTTTACCTGGGCCTTTTTATGGTTATGATGGTATTATCACATTTCTTCCTACGCCTTTGCCATATTCTATGCCTTATCTGCAACAAAATAATGATAAGGCATATAAACTCCCTCAGCCTCTCATTGAGATTACTTCACCAGGTGATGTTTATTTGAACAAGAGTGGATGGTCAACTCCATTACATCTTATAGTGCTTACGGTCTTTCTTCTGGTGTCGGGCTTTTCAGTCATCTGCTTTCTTACGGTGAAGGTGGTTAAGAATCAAGATATACCAAAGGACCAAAACAGAGAGTATGAATTGAAAAGTTCACCTGCAAAGAGAAAGAAGAGAAAGAAAATGCACAAGTCAGGAAAGAACAGCGACACTATTGATAAAATGGAAAACTATCTTTCTTCAGAAGATGAAGACGCACTGACACGAAACGATACTAATAGAGAAGAATGGGAGAACTTTAATCAAGTTGATGAAGGTTTTGATGGACGGAAAATTGGTAAATTATTCGTTTCAAATGAAGAGATTGCTAAGGGAAGCAATGGTACAATTGTACTGGACGGAAGATATGAAGGTCGACCAGTTGCAGTTAAGCGTCTTGTCAAAGCTCATCACAAGGTAGCCTATAAAGAAATCCGAAACCTCATTGTGTCTGACCGTCATCCAAACATTGTCCGATGGCATGGGGTGGAGTATGATCAAGATTTTATTTACCTTGCACTGGAACGTTGTACTTGCAACTTGGATGATTTGATAAAGGGCCAAATGGAGACAGGGAAGGATAATACGCAATATCTTTGGAAAGAAAATGGCTATCCATCAGCTCTATTGCTGAAATTGATGAGGGATATTGTTTCCGGGGTTGTTCATTTGCATGATCTAGGAATAATACATCGAGATTTGAAACCCCAAAATGTTCTAATAAACAACGAAAGATCCTTATGTGCAAAGCTTTCTGACATGGGCATTAGCAAACTTCTTCTTGAAAATATGTCCTCTTTGGGTCATAATGCTACTGGTGGGGGAAGTTCTGGTTGGCAAGCCCCAGAGCAGCTTGATCAAGGGCGCCAAACACGGGCGGTTGATATGTTCAGTTTAGGATGTATTCTTTTTTTCTGTATGACTCGAGGAAGACATCCATTCGGACAACATATTGAACGTGATATCAATATCGTGAAAAATAAAAAAAATCTTTGCTTAGTGCAATTCATTCCGGAAGCTGAGGATCTTATTAGTTGTTTATTAAACCATGACCCTGATCTAAGGCCAAAAGCAATTGAAGTATTGCACCATCCTTTTTTCTGGAGTTCCGAGACGAGACTTTCATTTTTACGTGACACCAGTGATAGGGTGGAACTGGAAGATAAAAATCTTAGTTCTGGTCTTTTGAGGGCGTTAGAAAGCATTGCCACAACAGCCTTAGGCGGTAAATGGGATGAAAATATGGAACCAGCTTTCATTGCTAACATTAGTCGTTACCGGCGTTATAAGTTTAACAGTGTTCGAGACTTGTTGCGGGTTATGAGAAACAAGCTAAATCATTATGGAGAATTGCCTCAAGAAATCCAGGAACTAGTTGGACCTGTTCCTGAAGGATTCAATGACTACTTTGCAAACCGATTCCCAAGACTCTTGATTGAAGTTTATAATGTTATATGCAAGCATTGCAAGGAGGAAGAGTGTTTTCAAAGGTATTTTAAAAATGATTTATTGCATTGA 2586 0.4014 MKLLFLFIFLLLSLLNQQHCSVVNTLSRSPTSRSILSLPPPKAATTALVAALDGTMYLVASQENGAVRVIWSFSTGSPIYSSYQAPINKDRGKTNTSSAPTSGFVECGDDWSLYMHDKILGKMRLSESIGEFVHRAPIISDDGTAIFGYKEDSLFEVEAKTGSIIQIHAKSDPGNASAPLRDDRLSAKNIITEDNKDLADPKKLNSSQPLLMLFRKDYTLKSVNTSSKIVLWNLTVTEFEAVLLCQHTTVDVEDEIPSDRGLNFAMPYPCQEMQNVFRLKKNFLLEPLITESLPGPFYGYDGIITFLPTPLPYSMPYLQQNNDKAYKLPQPLIEITSPGDVYLNKSGWSTPLHLIVLTVFLLVSGFSVICFLTVKVVKNQDIPKDQNREYELKSSPAKRKKRKKMHKSGKNSDTIDKMENYLSSEDEDALTRNDTNREEWENFNQVDEGFDGRKIGKLFVSNEEIAKGSNGTIVLDGRYEGRPVAVKRLVKAHHKVAYKEIRNLIVSDRHPNIVRWHGVEYDQDFIYLALERCTCNLDDLIKGQMETGKDNTQYLWKENGYPSALLLKLMRDIVSGVVHLHDLGIIHRDLKPQNVLINNERSLCAKLSDMGISKLLLENMSSLGHNATGGGSSGWQAPEQLDQGRQTRAVDMFSLGCILFFCMTRGRHPFGQHIERDINIVKNKKNLCLVQFIPEAEDLISCLLNHDPDLRPKAIEVLHHPFFWSSETRLSFLRDTSDRVELEDKNLSSGLLRALESIATTALGGKWDENMEPAFIANISRYRRYKFNSVRDLLRVMRNKLNHYGELPQEIQELVGPVPEGFNDYFANRFPRLLIEVYNVICKHCKEEECFQRYFKNDLLH* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4392 861 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 6 855 - -
Tpr4g4392 861 ProSiteProfiles Protein kinase domain profile. 459 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4392 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Tpr4g4392 861 SMART serkin_6 459 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4392 861 Gene3D Phosphorylase Kinase; domain 1 446 531 - -
Tpr4g4392 861 Pfam Ribonuclease 2-5A 729 855 IPR010513 GO:0004540|GO:0006397
Tpr4g4392 861 Gene3D KEN domain 726 860 IPR038357 -
Tpr4g4392 861 SUPERFAMILY Protein kinase-like (PK-like) 453 736 IPR011009 -
Tpr4g4392 861 SMART PGNneu 788 842 - -
Tpr4g4392 861 Pfam Protein kinase domain 461 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4392 861 Gene3D Transferase(Phosphotransferase) domain 1 532 725 - -
Tpr4g4392 861 PANTHER IRE1-RELATED 6 855 IPR045133 GO:0004521|GO:0004674|GO:0030968
Tpr4g4392 861 CDD RNase_Ire1 727 855 - -
Tpr4g4392 861 MobiDBLite consensus disorder prediction 387 418 - -
Tpr4g4392 861 ProSiteProfiles KEN domain profile. 726 857 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4392 Tpr-Chr4 51231681 51238882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4392 459 723 MAP Kinase Kinase Gene Family AT1G51660 30.496 2.41e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Tpr4g4392 Pkinase 9.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4392 K08852 - gmx:100788389 1124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1219 2 14257323 14262556 Tpr4g4392 4 51231681 51238882 PCT