Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4381 ATGGGTCTCTGTTTTTCCTTTCTCTTTCCTCCTTCTGCAACTCCCCAATCATCTTCTTCCTTCAACAAACCTCCTCTTTCTTCAGGTTCAACAAGCACTATTGGATTCTCTGCAACAACAAGCAGTGCAGGAAGAAGCCAATTCTCTGAGGTTGCAAGTGGAAGCATTGATGGTACTAATGAAGGGTCTCTTCGATTTCCTCCACCAAATGGTCAAATTCTTGATAGACCAAATTTGAAGGTTTTTAGTTTTGGTGATATGAAATCTGCAGCAAGAGGGTTCAAACCTGATACATTACTTGGTGAAGGTGGTTTTGGAAAAGTTTATAAAGGTTGGATGGATGAGAAAACTCTTACTCCTGCTAAAGCTGGTTCTGGAATTATGGTTGCTATAAAAAAATTGAACTCTGAAAGTACTCAAGGGTTTCAAGAATGGCAGTCAGAAGTCAATTTTTTAGGAAGACTTTCTCACCCAAACTTGGTGAAGCTATTGGGTTACTGTTGGGAAGATGAAGAGCTTCTTCTTGTGTACGAGTTTATGCCAAAAGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCACTTTCTTGGAACACAAGAATCAAAATAGCTATTGGTGCAGCTAGGGGTTTGGCTTTCTTGCATGATTCTGAAAAGCAAGTCATATACAGAGATTTTAAGGCCTCCAATATACTCCTTGACGGGAGTTATAATGCAAAAATATCAGATTTTGGATTAGCTAAATTGGGACCTTCTGGGGGACAATCACATGTAACTACAAGGGTCATGGGCACATATGGTTATGCTGCCCCAGAATACATTGCAACAGGGCACTTATATGTGAAGAGTGATGTGTATGGCTTTGGTGTGGTGCTATTAGAAATAATGACAGCCATGAGAGCACTGGACACAAAAAGGCCATCAGGGCAACAAAACTTGGTGGAATGGGTGAAACCTTTTCTCTCCAACAAGAAAAAGTTGAAAGGCATAATGGATGCTAGAATAGAAGGACAATACTCACCAAAAGCAGCAATACAAGCAGCACAACTTTCTCTTAAATGTCTAGAAAATGACCCTAAACAACGTCCTTCTATGAAAGAAGTACTTGAGTCATTGGAAGCTATTGAAGCTATTCAGGTCAAATCTAAGGAATCTAAAAACAACATTTCTCATCAAGCTCCAGTTGTTCAAGCTGCTAGGCACCAAAGAGCTGTAAAAGTATAA 1236 0.3964 MGLCFSFLFPPSATPQSSSSFNKPPLSSGSTSTIGFSATTSSAGRSQFSEVASGSIDGTNEGSLRFPPPNGQILDRPNLKVFSFGDMKSAARGFKPDTLLGEGGFGKVYKGWMDEKTLTPAKAGSGIMVAIKKLNSESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWEDEELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHDSEKQVIYRDFKASNILLDGSYNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEIMTAMRALDTKRPSGQQNLVEWVKPFLSNKKKLKGIMDARIEGQYSPKAAIQAAQLSLKCLENDPKQRPSMKEVLESLEAIEAIQVKSKESKNNISHQAPVVQAARHQRAVKV* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4381 411 SUPERFAMILY Protein kinase-like (PK-like) 72 377 IPR011009 -
Tpr4g4381 411 Gene3D Phosphorylase Kinase; domain 1 78 179 - -
Tpr4g4381 411 ProSitePatterns Protein kinases ATP-binding region signature. 100 133 IPR017441 GO:0005524
Tpr4g4381 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Tpr4g4381 411 ProSiteProfiles Protein kinase domain profile. 94 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4381 411 Pfam Protein tyrosine and serine/threonine kinase 98 376 IPR001245 GO:0004672|GO:0006468
Tpr4g4381 411 PANTHER OS01G0588500 PROTEIN-RELATED 52 392 - -
Tpr4g4381 411 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 52 392 - -
Tpr4g4381 411 CDD STKc_IRAK 100 379 - -
Tpr4g4381 411 Gene3D Transferase(Phosphotransferase) domain 1 180 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4381 Tpr-Chr4 51082071 51087726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4381 80 376 Glycoside Hydrolase AT3G07070 50.000 4.60e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr4g4381 PK_Tyr_Ser-Thr 3.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4381 - - gmx:100794193 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1200 2 14072101 14075047 Tpr4g4381 4 51082071 51087726 PCT