Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4378 ATGGACTGTTCTAATAAGACGGTAGATTGTGGTAGTAGTGGTCATGAATTTATTGAAGTTGACAAGTTTCAAGATGATGGCACATCTTGGGAGCCGGCAAAAGATATGTGTTTTTCTTCCGCGGACGACGTTAAATCTTTTTATCGGGAGTATGCTCTGAGAAAGGGGTTTGGGTGGAAGATTAGAACATCAAGAAAAGGGGATGATGGAGAATTATGCTACTTGATGCTATCATGCTCAAGAGAGGGGTATTCAATCTCAAATGTTCCATGTACATTGAAGACAAATCCGACAAGGGTGAAACAATGTCCTGCTAGGTTGTGTATCAAGATGGAAGAAGATGGATTGTGGTACATCAAAAAATTTGATCCTAGCCATTCTCACGAGTGCAGTCCTACAAAGGCAAGGTTGTTCAAGGCTAACAAGAAAATTAACTTGCATGTGAAGAGGACTATTGAAATCAATGATGATGCAGGAGTAACGATCAACAAGACTTTCCAATCTCTTGTTAAAGATGCGGGCGGGCATGAAAATATACCATTTTGTGAAAAAGACGTGAGAAATTATGTTAACAAGGAACGGCGTGCAATTGGAAAAGAAGGTGATGGTCAGGCTCTCATAAACTATTTTTTTGAAATGAGGGAACAAAATGCAAATTTCTTCTACGAGATAGATGTAGACAATGAATTTCATGTAAGAAATGTGTTTTGGGCCGATGCAATACATACATCTGCCGGTGCAAATGCAACTGTCTTGCAACCTACTCTAAATCCATGA 777 0.3938 MDCSNKTVDCGSSGHEFIEVDKFQDDGTSWEPAKDMCFSSADDVKSFYREYALRKGFGWKIRTSRKGDDGELCYLMLSCSREGYSISNVPCTLKTNPTRVKQCPARLCIKMEEDGLWYIKKFDPSHSHECSPTKARLFKANKKINLHVKRTIEINDDAGVTINKTFQSLVKDAGGHENIPFCEKDVRNYVNKERRAIGKEGDGQALINYFFEMREQNANFFYEIDVDNEFHVRNVFWADAIHTSAGANATVLQPTLNP* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4378 258 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 20 244 IPR031052 GO:0006355
Tpr4g4378 258 Pfam FAR1 DNA-binding domain 46 131 IPR004330 -
Tpr4g4378 258 PANTHER OS03G0843700 PROTEIN 20 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4378 Tpr-Chr4 51036851 51038671 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g4378 FAR1 1.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4378 - - cam:101513893 302.367