Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4332 ATGGGTGTATCCAAAAAATGGTTAAGAATCGTTACAACAAAGTTCCTAAGATCATCCAAGTCCAACAAAGACATAACTCTCCCTCCTCGTACAATTGTTTGCATAAATCAAACCCAACAAGCCATACATAGAAATGAATCAACCATTACCACCTCCAAAGAAGATTTTATCAGTTTGCCATCATCAACTATTAATTCTTCATCAATCACATTATTCACTAAGGAAGACTTTGCAGCAATCAAGATTCAAGCTTATTTTAGGGGTCATCTTGCAAGAAGAGCGCATAGAGCATTGAAAAGCCTAGTGAAATTGCAAGCATTGGTTCGTGGGGTGTGTGTGAGGAGACAATCGCGTATAGCGATGCAATGTATGCACGCGCTTGTTCGATTACAAGTCAAGGTTCGTGCCAGACAGTTACTTGGTACCTTTGATCACACGCAATACTAA 447 0.396 MGVSKKWLRIVTTKFLRSSKSNKDITLPPRTIVCINQTQQAIHRNESTITTSKEDFISLPSSTINSSSITLFTKEDFAAIKIQAYFRGHLARRAHRALKSLVKLQALVRGVCVRRQSRIAMQCMHALVRLQVKVRARQLLGTFDHTQY* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4332 148 PANTHER IQ-DOMAIN 5-RELATED 4 141 - -
Tpr4g4332 148 PANTHER OS04G0561100 PROTEIN 4 141 - -
Tpr4g4332 148 ProSiteProfiles IQ motif profile. 99 126 IPR000048 GO:0005515
Tpr4g4332 148 Gene3D - 74 126 - -
Tpr4g4332 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 119 IPR027417 -
Tpr4g4332 148 Pfam IQ calmodulin-binding motif 78 96 IPR000048 GO:0005515
Tpr4g4332 148 ProSiteProfiles IQ motif profile. 75 103 IPR000048 GO:0005515
Tpr4g4332 148 SMART iq_5 74 96 IPR000048 GO:0005515
Tpr4g4332 148 SMART iq_5 97 118 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4332 Tpr-Chr4 50586446 50587495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4332 63 140 IQD Protein Family AT3G51380 73.077 3.25e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4332 - - cam:101507643 182.956