Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4331 ATGAATTTTAATTCTTCTAAGTATATTTCCCCTTTTTCAGAATCACTTTTACCACCAAACGATCAATCACCTGATTGGAACAACAAAGCTGACAATGCATGGCAACTAACAGCAGCAACATTAGTGGGCCTTCAAACTGTTCCTGGGCTTATAATACTTTATGGCAGCATGGTTAAGAAAAAATGGGCCGTAAATTCAGCTTTCATGGGCCTATATGCATTTTCAGCTGTGTTAGTTTGTTGGGTTTTATGGGCCCATCAAATGGCATTTGGAAACAAGCTTTTGCCTTTTGTTGGAAAGCCCAATTTTGCTATGAGTCAAAAGTTTCTACTTTCAAAGGCATCAACACAATATTATTTACCAATGGCTGATTTTGTTTTCTATCAATTTGCTTTTGCTGCAATTACTCTTGTGTTGCTTGCAGGATCTTTGCTTGGGAGAATAAATTTTTTTGCATGGATGTTGTTTGTTCCTATGTGGCTTACATTTTCTTATACCATTGGTGCTTTCACTATATGGGGGAATGGATTTCTTGAAGGGAAAATAATTGATTATGCTGGTGGATTTGTAATTCATTTATCCTCTGGTGTTGCTGGTTTTACAGCTGCTTATTGGGTTGGTCCAAGAACTTCAGATGATAGGAAAAATTTCCCACCAAATAACATAATTCACATGCTTGGAGGTGCAGGGTTCTTATGGATGGGATGGACAGGGTTTAATGGTGGAGCACCATTTCAAGTGGGAGAGATTACATCCATAGCAATCTTCAATACTCATTTGTGCACTGCCACAAGCATTCTTGTTTGGATTTCTCTAGATATGATTGTATACAAGAAGGGCTCATTGATAGGTTCTGTCCAAGGAATGATGACTGGCCTTGTTTGCATTACACCAGGTGCAGGATTGGTGGATCCATGGGCAGCAATATTGATGGGAGCTTTGTCTGGTTCAATTCCATGGTACACAATGATGGTGTTGCACAAAAGAGTACCATTTTTTCAAAATGTAGATGATACATTAGGAGTTTTTCACACTCATGCCGTGGCTGGTTTTCTTGGAGGAATCCTTTCTGGTGTCTTTGCCAAGCCCAAACTTTTAAGGATGCTTTATGGGCCTATAACTTCTTATGGGCCTGGCTTATTTTATAGCTATTTTGATGAGAATATGGGCCTAGGAATTAGGCAAATATTGTACCAATTACTAGGAGCAATTTTTATTACTATTTGGAATGTTGTTATTACTAGCCTCATTTGTATCATTCTAAGTCACATTGTGGACCTTAGAATGAAAGAAGAAGACCTTGAAGTTGGTGATGATGCTATTCATGGAGAAGAAGCTTATGTATTATGGGGTGATGGAGAAAGCATGATACTCCCACTTCGTCTACATAAAAGTACTTCGACAATTCTTTCCATTTCTCACCAAAGACATTCAATTCCTATCAATAAAATTGATGAATAA 1461 0.3799 MNFNSSKYISPFSESLLPPNDQSPDWNNKADNAWQLTAATLVGLQTVPGLIILYGSMVKKKWAVNSAFMGLYAFSAVLVCWVLWAHQMAFGNKLLPFVGKPNFAMSQKFLLSKASTQYYLPMADFVFYQFAFAAITLVLLAGSLLGRINFFAWMLFVPMWLTFSYTIGAFTIWGNGFLEGKIIDYAGGFVIHLSSGVAGFTAAYWVGPRTSDDRKNFPPNNIIHMLGGAGFLWMGWTGFNGGAPFQVGEITSIAIFNTHLCTATSILVWISLDMIVYKKGSLIGSVQGMMTGLVCITPGAGLVDPWAAILMGALSGSIPWYTMMVLHKRVPFFQNVDDTLGVFHTHAVAGFLGGILSGVFAKPKLLRMLYGPITSYGPGLFYSYFDENMGLGIRQILYQLLGAIFITIWNVVITSLICIILSHIVDLRMKEEDLEVGDDAIHGEEAYVLWGDGESMILPLRLHKSTSTILSISHQRHSIPINKIDE* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4331 486 Gene3D Ammonium transporter AmtB like domains 13 450 IPR029020 -
Tpr4g4331 486 PANTHER AMMONIUM TRANSPORTER 12 475 - -
Tpr4g4331 486 TIGRFAM amt: ammonium transporter 31 447 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr4g4331 486 ProSitePatterns Ammonium transporters signature. 184 209 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tpr4g4331 486 PANTHER AMMONIUM TRANSPORTER MEP2 12 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr4g4331 486 PRINTS Rhesus blood group protein signature 129 145 IPR002229 GO:0005887
Tpr4g4331 486 PRINTS Rhesus blood group protein signature 223 241 IPR002229 GO:0005887
Tpr4g4331 486 PRINTS Rhesus blood group protein signature 254 276 IPR002229 GO:0005887
Tpr4g4331 486 Pfam Ammonium Transporter Family 33 447 IPR024041 GO:0008519|GO:0016020|GO:0072488
Tpr4g4331 486 SUPERFAMILY Ammonium transporter 26 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4331 Tpr-Chr4 50565206 50567852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4331 122 455 Inorganic Solute Cotransporters AT2G38290 58.209 3.57e-132 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4331 K03320 - gmx:100815876 768.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3685 2 39943522 39947973 Tpr4g4331 4 50565206 50567852 PCT