Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4320 ATGGTTGATGATAAGAATGCATCTGCACAAAATATGTTGCTGGGATTCATTGGAGGCATTACAACAGTTATGGCATTGACCTTATTGTTCTACCTCTTCTGGAAAAGGATCATTCCATTTTTTAAACAACCTAAGACTTTGAAAGGAAAGCAATTTAAAAGCTTGAAATATGAGAAAATATCTTTAAGGTGTTTTAATCTTGAGGAACTAGAGAGGGCTACACAAAATTTTAGCCAAGATTGCTTATTGGGTTCTGGTGCATTTGGTAATGTCTACAAGGGAACTTTTGAGTTAGAAGGAATACTAGCCATAAAGAGATCTCATTCTGAATCATTCTTAAGTATGGAGGAATTTAGAAATGAAGTTAGGCTTCTTTCAGCAGTAAAGCATAAGAATCTTATTGGTCTGGTTGGATATTGTGAGGAACCAGAACGAGATGGGGCAAAAATACTAGTCTATGAATATGTACCAAATGGTTCACTCTTGGAGTACATGATGGGAAACAGAAGGAGAAGCTTAACTTGGAAGCAAAGAATAAACATAGCAATAGGAGCAGCAAAAGGCATAGCTTATTTGCATGAAGAGGTGAAGCCAAGCATAATTCATCGTGACATCAAACCAAGTAACATACTATTAGGGGAATGTTTTGAGGCTAAGGTTTCAGATTTTGGGTTGGTAAAATCAGGGCCTACAGGTGATCAATCACATGTTAGTAGCCAAATCAAAGGGACACCAGGGTACCTTGACCCTGCCTATTGTTCAAGCTGCCATTTGACCAAATTTAGTGATGTCTATAGCTTTGGTGTCATACTGTTGCAACTTATTTCAGCTAGACCTGCTGTTGATAGTGCTGAAAATCCAAGCAATCAACATATTATCGATTGGGCAAGGCCTAGCATAGAGAAGGGTAACATTGAAGAAATCATGGATGCAAATTTATTTTGTGAAAGTGAGCCATGTGATATGAAAGTTATGCTACAAATGGGACAACTTGGTATAAGATGTGTGGCTCAAGAACCAAAACATCGTCCCACAATGACCCAAGTTTGTAGAGAACTAGAGCAAGCCCTCTACTCAGATGATGATAGGTTCACTAACAAGGATTCAGAAACCCATGGAGCAATGGAACACTTTGATTTTTCACAGAGCTATGTGAGCATAGATGGTGTTGGATTAGAGAAATTCCATGTTGATATGGATAGCTTCTCTTTTAAGAGCACAAACTTAAGGTGCCTAGAAAATAATAGTATTAGTATTGACATTGATGTTAAGAACAATTTGAGGAAAATATAA 1293 0.3743 MVDDKNASAQNMLLGFIGGITTVMALTLLFYLFWKRIIPFFKQPKTLKGKQFKSLKYEKISLRCFNLEELERATQNFSQDCLLGSGAFGNVYKGTFELEGILAIKRSHSESFLSMEEFRNEVRLLSAVKHKNLIGLVGYCEEPERDGAKILVYEYVPNGSLLEYMMGNRRRSLTWKQRINIAIGAAKGIAYLHEEVKPSIIHRDIKPSNILLGECFEAKVSDFGLVKSGPTGDQSHVSSQIKGTPGYLDPAYCSSCHLTKFSDVYSFGVILLQLISARPAVDSAENPSNQHIIDWARPSIEKGNIEEIMDANLFCESEPCDMKVMLQMGQLGIRCVAQEPKHRPTMTQVCRELEQALYSDDDRFTNKDSETHGAMEHFDFSQSYVSIDGVGLEKFHVDMDSFSFKSTNLRCLENNSISIDIDVKNNLRKI* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4320 430 SUPERFAMILY Protein kinase-like (PK-like) 56 354 IPR011009 -
Tpr4g4320 430 Gene3D Transferase(Phosphotransferase) domain 1 156 381 - -
Tpr4g4320 430 CDD STKc_IRAK 83 355 - -
Tpr4g4320 430 Pfam Protein tyrosine and serine/threonine kinase 82 353 IPR001245 GO:0004672|GO:0006468
Tpr4g4320 430 SMART serkin_6 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4320 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Tpr4g4320 430 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Tpr4g4320 430 PANTHER OS01G0750732 PROTEIN 20 383 - -
Tpr4g4320 430 ProSiteProfiles Protein kinase domain profile. 77 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4320 430 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4320 Tpr-Chr4 50379436 50382828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4320 13 376 Receptor kinase-like Gene Family AT1G51850 38.070 9.00e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr4g4320 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4320 - - gmx:106794267 652.129