Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4315 ATGGCTTCTATGGTTACATTAATCTTGATTTTATTTCTCTTTTTTTCACTAGTTTCAACAGGGAATTCACTTAGTTATAATTACTATGAAAAGACATGTCCTGATGTAGAGTTCATTATTGCCAAGACAGTAAAAGCTGCCACTGCTTCGGACAAAACTGTCCCTGCAGCGCTTCTCCGAATGCACTTCCATGACTGCTTCATTCGGGGATGTGATGCTTCTGTGCTGCTAAACTCAAAAGGAAGCAACAAAGCAGAAAAAGATGGACCACCAAATGTTTCTCTGCATGGATTCTTTATCATTGATAATGCAAAGAAAGCGGTAGAAGCTGCTTGTCCTGGTGTGGTCTCTTGTGCTGATATCCTAGCACTAGCAGCAAGAGATGCTGTATTTCTGTCTGGAGGTCCAGGTTGGGATGTTCCTAAAGGAAGAAAAGATGGAAGAATATCCAAGGCCAGTGAAACAATACAGTTACCATCACCAAACTTCAACATATCACAACTACAGAAGAGCTTCTCTCAAAGAGGTCTCTCAATGGAAGACTTGGTAGCCTTGTCAGGAGGACATACCTTAGGTTTCTCTCATTGTTCATCCTTCAACAGCAGAATCCACAACTATGATGCTACACATGATGTGGACCCTAAATTAAACCCATCATTTGCATCAAAGCTAAAATCAATTTGTCCAATAAAAAATCAGTTAAAGAATGCAGGCAGCACTTTAGATGCTTCTTCAACTACATTTGATAATACATATTACAAGTTGATCCTCCAAGGGAAGGCTATATTTTCTTCTGATCAAGTTCTTATTGATACTCCAAATACCAAAGATCTTGTATCTAAGTTTGCTACCTCACAAGATGAATTTTATAAGGCTTTTGTGAAATCCATGATCAAAATGAGTAGCATCAATGGTGGTCAAGAGATTAGGAAGGACTGTAGGGTGGTTGGTTAA 954 0.3899 MASMVTLILILFLFFSLVSTGNSLSYNYYEKTCPDVEFIIAKTVKAATASDKTVPAALLRMHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNVSLHGFFIIDNAKKAVEAACPGVVSCADILALAARDAVFLSGGPGWDVPKGRKDGRISKASETIQLPSPNFNISQLQKSFSQRGLSMEDLVALSGGHTLGFSHCSSFNSRIHNYDATHDVDPKLNPSFASKLKSICPIKNQLKNAGSTLDASSTTFDNTYYKLILQGKAIFSSDQVLIDTPNTKDLVSKFATSQDEFYKAFVKSMIKMSSINGGQEIRKDCRVVG* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4315 317 Pfam Peroxidase 41 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Tpr4g4315 317 PANTHER PEROXIDASE 7 316 - -
Tpr4g4315 317 SUPERFAMILY Heme-dependent peroxidases 24 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 Gene3D Peroxidase, domain 2 159 300 - -
Tpr4g4315 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601|GO:0042744
Tpr4g4315 317 Gene3D - 27 316 - -
Tpr4g4315 317 PANTHER PEROXIDASE 25-RELATED 7 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 ProSiteProfiles Plant heme peroxidase family profile. 23 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g4315 317 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4315 Tpr-Chr4 50342922 50345548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4315 2 316 Peroxidase AT5G42180 64.241 9.21e-158 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4315 K00430 - gmx:102665908 512.301