Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4312 ATGGAAGATGTTTGGAAAGACATCAACCTCCCTTCCTTAAACAACAATATGAACACACCAGTTTCTTCTCCCTCCTTAAAGACACCAACTTCTCTTCATTCCTCCATCAACCTTAACTCTCTACCTGAGTTTTATTTCGACCCTCTTGAACACAAGAACTTGCAATTAGAGCAGAGCCACCACCACACTAGTACGCTCTCAAATGTTGAAGATATATTGAGCAACACAATAGAAAGAAGAAATAACAGAATAATGAAGAATAGAGAATCTGCTACACGATCAAGAGCAAGAAAGCAGGCTTATATATTTGAGTTGAAGAAAAAAGTGAAGAGCTTGGAAGAAGAGAATGCCAGACTCAAAAGACAAAACCATTTGTGTGCCGAAGCCAAGCAGCAGAGGAATGGAAATCTGTATAGAACATTAACAGCTCCATTTTAA 438 0.3858 MEDVWKDINLPSLNNNMNTPVSSPSLKTPTSLHSSINLNSLPEFYFDPLEHKNLQLEQSHHHTSTLSNVEDILSNTIERRNNRIMKNRESATRSRARKQAYIFELKKKVKSLEEENARLKRQNHLCAEAKQQRNGNLYRTLTAPF* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4312 145 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 145 IPR043452 GO:0003700|GO:0045893
Tpr4g4312 145 PANTHER PROTEIN FD 1 145 - -
Tpr4g4312 145 SMART brlzneu 75 139 IPR004827 GO:0003700|GO:0006355
Tpr4g4312 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 122 IPR004827 GO:0003700|GO:0006355
Tpr4g4312 145 CDD bZIP_plant_BZIP46 79 125 - -
Tpr4g4312 145 SUPERFAMILY Leucine zipper domain 79 129 IPR046347 GO:0003700|GO:0006355
Tpr4g4312 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 83 97 IPR004827 GO:0003700|GO:0006355
Tpr4g4312 145 Coils Coil 95 132 - -
Tpr4g4312 145 Pfam bZIP transcription factor 79 128 IPR004827 GO:0003700|GO:0006355
Tpr4g4312 145 Gene3D - 77 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4312 Tpr-Chr4 50328319 50331053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4312 71 145 bZIP Transcription Factor Family AT3G56850 48.193 6.81e-16 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g4312 bZIP_1 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4312 K14432 - gmx:102667912 119.783