Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4308 ATGATGAAGCTTTTCACATTTGTTAAATCTTTTTATTTCTGTTCTTTTCTAGTTTTGTATCATCCATTTGCTGTGACAGCTACAATCAAACCTCTTTATAAGAACTATTCATTTCCTGCTGTTATTGCATTCGGTGATTCAATCGTAGATACTGGTAATAACAACTATATTGCAACGATAGTTAAGTCGAATTTCAAACCGTACGGGAAGGATTTTATTGGAGGAAAACCGACAGGAAGGTTTTGCAATGGAAGAATCCCTTCTGATTATTTCCTTGAATACGTTGGTATTAAGGAGGCTATGCCAGCTTATCTTGATCCAAATTTGAGTACTGAAGACCTCTTAACAGGAGTGTGTTTTGCATCATCTGGTGCAGGATATGATCCTCTTACAATTGAACTAGCATCAGTGTTGTCAGCAGAAGATCAACTAGATATGTTCAAAGAGTATATTGGAAAATTGAAGGTAGCTGTGGGAGAAAATAGGACAGCTGAGATTATTGCAAATAGCATAATTATAATAAGCATGGGAACCAATGATATTGCAGGAACATATTATTTGTCACCCTTCAGAAAGCATCAGTATGATATTGAGAAGTATACAACTATGATTATTAGTTCAAATTCAAAATTTGTTGAGGATCTTTATGAATTGGGAGCAAGAAGGATTGGAGTGTTCAGTTTATCACCAGTTGGATGTGTGCCACTTCAAAGAACTATAAAAGGAGGCATAGGAAGGGATTGTGTAGAAAATATAAATGATGGAGCATTGATTTTCAACTCCAAGCTTGCCACTTCACTTATAGATCTATCAAAAAAACTTCCAGATTCCAGGGTTGTCTACCTTGAAAATTTTAGTCTATTGTATGACATTATCATAAACCACAATAAATATGGATTTGAAAATGGGGATGGTTCATGCTGTGGCATTGCAAATATAGAACTTGGTCCTCTTTGTAGTTCTTTCACCTTAAGAGTGTGTCCAGATACCACTAAATATGTGTTCTGGGACAGTTATCATCCCACAGAGAAAGCTTACAAAATACTTGTCACAGAAATCTTAAATAAAAAGATTGATGAGTTTGTTTGA 1089 0.3508 MMKLFTFVKSFYFCSFLVLYHPFAVTATIKPLYKNYSFPAVIAFGDSIVDTGNNNYIATIVKSNFKPYGKDFIGGKPTGRFCNGRIPSDYFLEYVGIKEAMPAYLDPNLSTEDLLTGVCFASSGAGYDPLTIELASVLSAEDQLDMFKEYIGKLKVAVGENRTAEIIANSIIIISMGTNDIAGTYYLSPFRKHQYDIEKYTTMIISSNSKFVEDLYELGARRIGVFSLSPVGCVPLQRTIKGGIGRDCVENINDGALIFNSKLATSLIDLSKKLPDSRVVYLENFSLLYDIIINHNKYGFENGDGSCCGIANIELGPLCSSFTLRVCPDTTKYVFWDSYHPTEKAYKILVTEILNKKIDEFV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4308 362 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 41 52 IPR008265 GO:0006629|GO:0016298
Tpr4g4308 362 CDD SGNH_plant_lipase_like 39 356 IPR035669 -
Tpr4g4308 362 Pfam GDSL-like Lipase/Acylhydrolase 41 350 IPR001087 GO:0016788
Tpr4g4308 362 Gene3D SGNH hydrolase 29 358 IPR036514 -
Tpr4g4308 362 SUPERFAMILY SGNH hydrolase 41 355 - -
Tpr4g4308 362 PANTHER GDSL ESTERASE/LIPASE EXL3 2 361 - -
Tpr4g4308 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4308 Tpr-Chr4 50289898 50291853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4308 35 355 Pollen Coat Proteome AT1G75910 40.123 1.08e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4308 - - mtr:MTR_8g075200 620.928