Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4306 ATGAAATCACTCTTTCAAATGCTTTTTTCTCTAAGGCTTCAAATAATTTATTTCTGTTATTTCATAGCCATAATCTTGCAACATGTTTCTTCTAAGAGTCTACCAAACAATGAAACAGTTCCAGCAGTTTTTGTATTTGGTGACTCTATAGTTGATCCAGGAAATAACAACTATATCAACACTATTGTCAAATGTAATTTTCCACCATATGGTAGAGATTTTGATGGAGGAATTCCAACTGGCAGGTTCAGCAATGGTTTAGTCCCATCAGACATAATTGCTGAAAAATTTGGAGTCAAGAAAGTTTTACCTGCTTATCTTGATCCTAATATACAACTTCAAGATCTTCTTACCGGTGTAAGCTTTGCATCAGGTGGTGCTGGATATGATCCTCTAACCTCGCAAATAATGTTTGTGAAGTCATTATCAGATCAATTAGACATGTTCAAGGAGTACAAGAAGAAGGTAGAGGAAGCAGTTGGAGAAAAGAAAAGAGAAAAAATAGTATCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCTAATACTTATGCTCAAACTCCATTTAGACGTATTCAGTATGATATTCCATCATACACAGATTTCCTACTTTCTGAAGCCTCAAAATTCTTGCAGGAACTATATGGACTAGGAGGTAGAAGGATTGGAGTATTCAGTATACCAGCTATAGGGTGTGTGCCTTCACAAAGAACAATTAATGGAGGCAAACATAGAGAATGTTTAAATTCTTCCAACCAAGCAGCACAACTCTTCAATTCTAAGCTCTTCTTCAAAATGAAGGCACTTGGGAAAGAGCATTCAGATGCTAGATTTGTATATCTAGATTCTTACAATCCATTTGTGGACATCATTCAAAATCCTTCTAAATATGGTTTTAATGAGATAGATAAAGGATGTTGTGGTACAGGAGATATAGAAGTTGGGATTTTGTGCAATCCTTTGATGAACACATGCTCAAATCGTTCAGATTATGTTTTTTGGGATAGTTATCATCCTACAGAGAAGACTTATTATGTGCTTAGTTCACTTGTACTTGATAACAAAATTAAGGACTTCTTCTAA 1092 0.3498 MKSLFQMLFSLRLQIIYFCYFIAIILQHVSSKSLPNNETVPAVFVFGDSIVDPGNNNYINTIVKCNFPPYGRDFDGGIPTGRFSNGLVPSDIIAEKFGVKKVLPAYLDPNIQLQDLLTGVSFASGGAGYDPLTSQIMFVKSLSDQLDMFKEYKKKVEEAVGEKKREKIVSKSIYIVCIGSDDIANTYAQTPFRRIQYDIPSYTDFLLSEASKFLQELYGLGGRRIGVFSIPAIGCVPSQRTINGGKHRECLNSSNQAAQLFNSKLFFKMKALGKEHSDARFVYLDSYNPFVDIIQNPSKYGFNEIDKGCCGTGDIEVGILCNPLMNTCSNRSDYVFWDSYHPTEKTYYVLSSLVLDNKIKDFF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4306 363 Gene3D SGNH hydrolase 27 359 IPR036514 -
Tpr4g4306 363 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
Tpr4g4306 363 Pfam GDSL-like Lipase/Acylhydrolase 43 352 IPR001087 GO:0016788
Tpr4g4306 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 362 - -
Tpr4g4306 363 PANTHER GDSL ESTERASE/LIPASE EXL3 4 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4306 Tpr-Chr4 50280290 50283959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4306 19 358 Pollen Coat Proteome AT1G75910 39.481 2.61e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4306 - - ahf:112723705 533.487