Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4292 ATGGGTTCTATTGGAATTCAAAGTTCAGAAACTGAAGTTGTTACCATTGATGTACTTGCAACCAAGTCTCTCATCGAAACAACCCATGTTTATCTTGATGTTAGAACGGTGGAAGAGTTTCAAAAAGGGCACGTGGATGCAGAGAAGGTCATTAACATTGCATACATGTTTAATACAGAAGAGGGGAGGGTGAAGAACCCAGAGTTTCTGAAGGAGGTTTCATCTCTCTGCAACAAAGAAGATCACCTCATCGTGGGTTGTCAAAGTGGGGTGAGGTCTCTGTATGCAACTGCTGATCTTTTGGCTGAAGGGTTTAAGGATGTTTCCAACATGGGAGGAGGTTATTTGGATTGGGTAAAAAAGGAATTTCCAGTCAAGATAGTAGATGTCACTAAATAG 399 0.4135 MGSIGIQSSETEVVTIDVLATKSLIETTHVYLDVRTVEEFQKGHVDAEKVINIAYMFNTEEGRVKNPEFLKEVSSLCNKEDHLIVGCQSGVRSLYATADLLAEGFKDVSNMGGGYLDWVKKEFPVKIVDVTK* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4292 132 CDD RHOD 30 119 - -
Tpr4g4292 132 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Tpr4g4292 132 Gene3D - 5 127 IPR036873 -
Tpr4g4292 132 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 126 - -
Tpr4g4292 132 SMART rhod_4 16 124 IPR001763 -
Tpr4g4292 132 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 126 IPR044684 GO:0003824
Tpr4g4292 132 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Tpr4g4292 132 Pfam Rhodanese-like domain 26 120 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4292 Tpr-Chr4 50083387 50085885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4292 3 125 Sulfurtransferasese or Rhodanese AT5G66170 55.285 2.21e-49 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4292 - K15692 gmx:100792251 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4292 4 50083387 50085885 Tpr4g4292 4 50083387 50085885 ECH
Tpr2g1115 2 13108569 13112914 Tpr4g4292 4 50083387 50085885 PCT
Tpr2g1117 2 13121146 13123717 Tpr4g4292 4 50083387 50085885 PCT