Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4286 ATGGCAGTGCCAGAATATTCCTCTTCATCTTCCTTCAGTTATGGATTCACCTATGATGTGTTCCTCAGCTTTAGAGGATTAGACACTCGCTATGGTTTTACCGGAAATCTCTACAAAGCACTTCTTGACCAAGGAATCCACACATTCATTGACGATGAAGAGCTACAAAGAGGACATGAAATCACACCATCACTTTTAGAGGCAATTGAAGAGTCAAGAATTGCCATAATTGTACTTTCTAAAAACTATGCATCTTCATCATTTTGCTTACAAGAACTTGTCAAGATCCTTGACTGCATTAAGGGGAAAGGTAGATTGGTTTGTCCAATCTTTTATGATGTGGATCCTTCTGATGTGAGGAAGCAGACAGGATCTTACGGTGAAGCTTTAGCTATGCATGCAGAGAGATTCATTGATATCTTGCCAAAATGGAAGATAGCTTTGCGACAAGTAGCTAACTTGTCTGGCTGGCATTTCAAAATTGGGGATGGATATGAATATGAGTTTATTGGAAAGATTGTTGAACATGTTTCCAAGAAAATCAACCGTGTGGCTTTACCCGTGGCTGACTACCCGGTTGGACTTGAGCCTCGAATGCTAGAAATAAATTCACTTCTTGATGCTGGGTCTGATGATGAGGTCAAAATGATCGGCATCCATGGAATTGGAGGAATAGGGAAAACTACACTTTCTATTGCGGTTTATAACATGATTGCCGACCAATTTGAAGCTTTGTGTTTTCTTGAAAATGTGAGAGAAAATTCAAACAAACACGGGTTACAACATCTGCAAAAGATTCTTCTTTATGAAACACTTGGAGAGAAGAAAATTAAGTTATCAAGTGTCAAACAAGGAATTTCAATAATAAAACATAGACTCCAGCAGAAAAAAGTTCTTTTGATTTTAGATGATGTTGACAAAATAGAACAACTGGAGGCCTTGGTTGGAGGGTCTGATTGGCTTGGTTCCGGAAGCAGAGTTATTATTACAAGTCGAGACAAACATTTGTTGGAAAGTCACGGGGTTAATAGAACATATGAATTAAATGTGTTAGATGAGAAAGAGGCTCTTCAATTGCTTACTTGGAAAGCTTTTAAAGCAGAGAAATTTCATCCTAGATACTTGGATGTCATGAAACGCGTAGTAGCCTATGCTTCGGGACTTCCATTGGCTTTAACAGTAATGGGTTCCAATTTATTTGGAAAGAATATACAAGAATGGGAATCTGCATTACATCGATATGAAATCATTCCTAATAAAGAGATCCAAAATATACTCAAAGTAAGTTTTGATGCTTTGGAGGAAGATGAACAAAGTGTTTTTCTTGACATAGCTTGTTTCTATACAGGAACAAAACATACATTGACAAGTGTAGAAAAGATGCTTCATGTTCATTATGATGCTTGCATGAAATATCATATTGGAGTATTGGTTGAAAAATCTCTCATAAAGATTAATTGGTTTGGTGGATTCAGTGTGCATGACTTGATAGAAGACATGGCTAAAGAAATTGTTCGATTGGAATCACCAGACGACCCTGGAAAACGTAGTCGTTTATGGTTTCATGAAGATATAATTCAAGTTTTAGAAGACAATACAGGAACTAGTGCGATTAAAACCATATATCTGATGTGTAAAAACTATGAGGTAGAATTGGATGAATCAGCCTTCAAGAAGATGAAAAATCTCAAAACTCTCGTTATCAAAGATGGCCATTTTTCCAAAGGACCCAAGTATCTTCCAAATAGTTTAAGAGTAGTCGAATGGGAAGGATATCCTTCAGAATATTTACCACATGATTTTCATCCAAAGAAACTTGCCATATTGAACTTACCAAAAAGTTGCATAACATCACTAAAGTTGGCTGACTCATTGAAAAAGTTCTTGAATATTAAGATTTTGAATTTTGATGAGGCAGCTTGTTTGACTGAAATACCTGATGTGTCTTCTCTCTTAAATTTAGAAGAAATTTCATTTAAAAATTGTAAGAGTTTAATTACAATTCACGAATCTGTCGGGTTATTCGATAAACTTAAAGTCTTGAGTGCCAGAGGCTGTAGTAAGCTTAGAAGATTTCCACCTATCAAATTGATGTCCCTTGAGCAACTTGATCTTTCATTTTGCCTGAACCTCGAGAACTTTCCGCAAATACTGGGGAAGATGGAAAATTTAACGGAACTTGTGCTGGAAGAAACTCCAATAAAAGAATTGCCATGTTCATTCCAAAATCTTACTCATCTTCAAACATTACAACTACGTTATTGTGGAACGTTTAGTTTGCCAAGTAACTTTTTCATGATGCCAAATTTGGTTGAGATTATTGCTTGGAAATTAGAAGGGTGGATATTGCCAAAGCAATCTAAGAGTGAACAAAGAATTTTTTCAACGCTGTCTTCGAATGTAGAATGTCTTCGTCTCCCATTATGCAAACTATCAAATGACTTTTTTCAAACAGGTCTCATATGGTTTAGAAATGTGAAAGAGTTAGACTTATCGGGTAATAATTTCACAATTCTTCTCGAAGGAATTAAAGAATGTCATTTGTTAAGGAATCTTTGTTTGGATTATTGTCAGTATCTTCGAGAAGTTAGAGGAATACCGCCAAACTTGGAAATATTTTCTGCACGATTGTGTAAATCTTTGACCTCTACAGAAATGTTACTGAATCAGGAATTGCATGAAGCTGGAAGTACCATGTTTAAGTTGCCGGGATCTAGAATTCCAGATTGGTTCGAGCACTGTAGTAGCGGAGGGTCAATTTCTTTTTGGTTTCGTAACAAGTTTCCTGCTATAGCTCTTTGTCTTGTTCCCGATTCGATGTTTGTCACATCTTCAATTTATCCTACCGTGATCATCAATGGCAATAAATGTGACCTTGACTCTAGGGACACAGATGAATACGGTGAACCTAGTTTGTTGATTGAACCAGATCATACATATATTTTTGATCTTCAAAAGATGAAGTTTGAAGATAATTTAGATGAAGCACTTTTAAACAACGAATGGAACCACGTAGAGATTATGTATACGGATGCAAACAATCACTCAATGCTTATAGAAAGTGGAATCCATGTATTAAAACAGAAGAGTAGAATAGAGGATATTCGATTCACCAACCCGTGA 3123 0.3625 MAVPEYSSSSSFSYGFTYDVFLSFRGLDTRYGFTGNLYKALLDQGIHTFIDDEELQRGHEITPSLLEAIEESRIAIIVLSKNYASSSFCLQELVKILDCIKGKGRLVCPIFYDVDPSDVRKQTGSYGEALAMHAERFIDILPKWKIALRQVANLSGWHFKIGDGYEYEFIGKIVEHVSKKINRVALPVADYPVGLEPRMLEINSLLDAGSDDEVKMIGIHGIGGIGKTTLSIAVYNMIADQFEALCFLENVRENSNKHGLQHLQKILLYETLGEKKIKLSSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEALVGGSDWLGSGSRVIITSRDKHLLESHGVNRTYELNVLDEKEALQLLTWKAFKAEKFHPRYLDVMKRVVAYASGLPLALTVMGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFDALEEDEQSVFLDIACFYTGTKHTLTSVEKMLHVHYDACMKYHIGVLVEKSLIKINWFGGFSVHDLIEDMAKEIVRLESPDDPGKRSRLWFHEDIIQVLEDNTGTSAIKTIYLMCKNYEVELDESAFKKMKNLKTLVIKDGHFSKGPKYLPNSLRVVEWEGYPSEYLPHDFHPKKLAILNLPKSCITSLKLADSLKKFLNIKILNFDEAACLTEIPDVSSLLNLEEISFKNCKSLITIHESVGLFDKLKVLSARGCSKLRRFPPIKLMSLEQLDLSFCLNLENFPQILGKMENLTELVLEETPIKELPCSFQNLTHLQTLQLRYCGTFSLPSNFFMMPNLVEIIAWKLEGWILPKQSKSEQRIFSTLSSNVECLRLPLCKLSNDFFQTGLIWFRNVKELDLSGNNFTILLEGIKECHLLRNLCLDYCQYLREVRGIPPNLEIFSARLCKSLTSTEMLLNQELHEAGSTMFKLPGSRIPDWFEHCSSGGSISFWFRNKFPAIALCLVPDSMFVTSSIYPTVIINGNKCDLDSRDTDEYGEPSLLIEPDHTYIFDLQKMKFEDNLDEALLNNEWNHVEIMYTDANNHSMLIESGIHVLKQKSRIEDIRFTNP* 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4286 1040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1009 IPR044974 GO:0006952
Tpr4g4286 1040 Gene3D - 350 429 IPR042197 -
Tpr4g4286 1040 SMART till_3 17 154 IPR000157 GO:0007165
Tpr4g4286 1040 Gene3D Ribonuclease Inhibitor 788 898 IPR032675 -
Tpr4g4286 1040 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Tpr4g4286 1040 Pfam TIR domain 18 182 IPR000157 GO:0007165
Tpr4g4286 1040 Pfam NB-ARC domain 205 415 IPR002182 GO:0043531
Tpr4g4286 1040 SUPERFAMILY "Winged helix" DNA-binding domain 420 530 IPR036390 -
Tpr4g4286 1040 PRINTS Disease resistance protein signature 216 231 - -
Tpr4g4286 1040 PRINTS Disease resistance protein signature 292 306 - -
Tpr4g4286 1040 PRINTS Disease resistance protein signature 385 399 - -
Tpr4g4286 1040 PRINTS Disease resistance protein signature 695 711 - -
Tpr4g4286 1040 Gene3D - 13 185 IPR035897 -
Tpr4g4286 1040 Gene3D - 186 346 IPR027417 -
Tpr4g4286 1040 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Tpr4g4286 1040 Gene3D Ribonuclease Inhibitor 522 787 IPR032675 -
Tpr4g4286 1040 PANTHER ARCHAEAL ATPASE 28 1009 - -
Tpr4g4286 1040 Gene3D - 430 504 IPR036388 -
Tpr4g4286 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Tpr4g4286 1040 SUPERFAMILY L domain-like 540 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4286 Tpr-Chr4 50009849 50019552 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4286 12 806 WRKY Transcription Factor Family AT4G12020 31.917 1.37e-84 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4286 - - gmx:100780257 1231.08