Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4285 ATGGCTTTGTTGACACCCTCTTCATCCTTCTGTTATGGATTCACTTACGATGTATTCCTTAGCTTTAGAGGTCTAGACACTCGCTATGGTTTCACCGGCAATCTCTACATAGCTCTTCATAACAAGGGAATCCATACCTTTATTGATAATGAGGAGCTTGAGAGAGGACAAGAAATCACACCATCACTTCTTAAAGCAATTGAAGAGTCTAGAATTGCCATTATTATACTCTCTGAGAACTATGCATCTTCTTCATTTTGCTTAGACGAACTTGTTAAGATCCTTGACGACATTAAGGGAAAGGGTAGGTTGGTTTTGCCAATCTTTTATGATATAGATCCTTCTATTGTGCGAAAGCAGGCAGGGTCTTACGGAGAAGCTTTAGCTATGCATGAGGAGAGATTCAAGAATAACATGCAGAGGTTGCATAAATGGAGATCAGCTCTACAACAAGTAGCTAACTTGTCAGGCTGGCATTTCAAAAAAGGTGAGGGATATGAATATGAGTTTATTGGAAATATAGTTGAACATGTTTCCAACAAGATGAATCGTGTTGCTTTACCTGTTGCTGACTATCCGGTTGGACTAGAGCCTCGAATGCTAGAAATAAATTCACTTCTTGATGTTGGGTCTGAAGAGGTCAACATGATTGGGATCCATGGAAACGGCGGGATAGGGAAAACAACACTTGCTCTGGCGGTTTATAATTTGATTGCCGACCACTTTGAAGCTTTGTGTTTTCTTGAAAATGTGAGAGAAAATTCAAACAAACATGGGTTAGAACATCTCCAAAAGATTATTCTTTCAGAAACACTTGGAGAAAAGAAAATTAAGTTATCAAGTGTCAAACAAGGAATTTCAATAATAAAACATAGACTCCAGCAGAAAAAAGTTCTTTTGATTTTAGATGATGTTGACAAAATAGAACAACTGGAGGCCTTGGTTGGAGGGTCTGATTGGCTTGGTTCCGGAAGCAGAGTTATTATTACAAGTCGAGACAAACATTTGTTTGAAAGTCATGGGGTTAACAGAACATATGAATTAAATGTGTTAGATGAGAAAGATGCTCTTCAATTGCTTACTTGGAAAGCTTTTAAAGCAGAGAAATTTCATCCTAGTTACTTGGATGTCATGAAACGCGTAGTAGCCTATGCTTCGGGACTTCCATTGGCTTTAACAGTAATGGGTTCCAATTTATTTGGAAAGAATATACAAGAATGGGAATCTGCATTACATCGATATGAAATCATTCCTAATAAAGAGATCCAAAATATACTCAAAGTAAGTTTTGATGCTTTGGAGGAAGATGAACAAAGTGTTTTTCTTGACATAGCTTGTTTCTATACAGGAACAGAACATACATTGACAAGTGTAGAAAAGATGCTCCATGTTCATTATGATGCTTGCATGAAATATCATATTGGAGTATTGGTTGAAAAATCTCTCATAAAGATTAATTGGTTTGGTGGATTCAGTGTGCACGACTTGATAGAAGACATGGCTAAAGAAATTGTTCGATTGGAATCACCAGACGAACCTGGAAATCGTAGTCGATTATGGTTTCACGAAGATATAATTCAAGTTTTAGAAGACAATACAGGAACTAGCGCGATTAAAACCATATATCTGATATGTGAAAATGAAGTGGAATTGGATGAATCGGCTTTCAAGAAGATGAAAAATCTCAAAACCCTTGTTATCATCATTATGAAAGGTGGCCATTTTACCAAAGGACCGAAATATCTTCCTAATAGTTTAAGAGTAGTCAAATGGGAGGGATATCCTTCTGAATATTTACCACAAGATTTTCATCCGAAGAAACTTGCCATATTAACCTTGCGAAAAAGTTGCATAACGTCACTCGAGACCGACTCATTGAAAAAGTTTTTGAATGTTAAGATTTTGAATTTTGACGAGGCAAATTGTTTGACAGAAATACCTGATGTGTCTTGTCTCTTAAATTTAGAAGAATTTTCATTTCACAATTGTAACAATTTAATTAAAATTCACGAATCAGTCGGGTTATTGGATAAACTTAAAGTTTTGAGTGCCAGAGGTTGTACTAAGCTTAGAAGATTTCCACCTATCAAATTGGCGTCCCTTGAGCAACTCGATCTTTCATTTTGCCTGAACCTCAAGAGTTTTCCAGAAATATTAGGGAAGATTGAAAATATAACAGAACTTGTGTTGGAAGGAATCCCAATAATTGATTTGCCATTTTCATTCCAAAATCTTACTCATCTTCAAACATTACAACTACGTTGTTGCGGAACTTTTAGTTTACCAAGAAACTTATTCATGATGCCAAATTTGGTTGTGATTATTGCTTGGGTATTAAATGGGTTGATATTTCCAAAGCAATCCGAGGGTGAACAAACAGTTATTTTAACGGTGACTTCAAATGTAGAACGTCTTTATCTCCCATATTGCAGACTATCAAATGACTTTTTTGCAACAAGTCTCACATGGTTTAGAAACGTGAAAGAATTAATCTTAACGGGTAATAATTTTACAATTCTTCCGGAATGCATTAAAGAATATCATCTATTAAGTGAGCTTCATGTGGATGACTGCAAATATCTTCGAGAAGTTAGAGGAATACCGCCAAACTTGGAAATATTTTCTGCACTATGGTGTAAATCTTGGACCTCTACAGAAATGTTACTGAATCAGGAATTGCATGAAGCTGGAAGTACCATGTTTAAGTTGCCGGGATCTAGAATTCCAGATTGGTTCGAGCACTGTAGTAGCGGAGGGTCAATATCTTTTTGGTTTCGTAACAAGTTTCCTGCTATAGCTGTTTGTCTTGTTCCCGATTCGATGTTTGTCATTTCTTCAATCTACCCTATCGTGATCATCAATGGCAAAGAAAGTCAACTTGACTCTAGGAACATGAATGAATACGGCGGTGATCATAGTTTGTATGTTAGACCAGATCATACATACATTTTTGATCTTCAAAAGATAATAAAGTTCGAAGATAATTTGGATGAAGCGCTTTTAAACAAAGAATGGAACCACATGGAGATTATGTATAAGGACAAAAACAATCACTCAATGTTTATAGAAAGTGGAATCCATGTATTCAAACAGAAGAATAGAATTGAGGATATTCGATTCACCGACCCGACCCTTGAAGAAAGCACAAATCTCCAAGCTTAA 3162 0.3624 MALLTPSSSFCYGFTYDVFLSFRGLDTRYGFTGNLYIALHNKGIHTFIDNEELERGQEITPSLLKAIEESRIAIIILSENYASSSFCLDELVKILDDIKGKGRLVLPIFYDIDPSIVRKQAGSYGEALAMHEERFKNNMQRLHKWRSALQQVANLSGWHFKKGEGYEYEFIGNIVEHVSNKMNRVALPVADYPVGLEPRMLEINSLLDVGSEEVNMIGIHGNGGIGKTTLALAVYNLIADHFEALCFLENVRENSNKHGLEHLQKIILSETLGEKKIKLSSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEALVGGSDWLGSGSRVIITSRDKHLFESHGVNRTYELNVLDEKDALQLLTWKAFKAEKFHPSYLDVMKRVVAYASGLPLALTVMGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFDALEEDEQSVFLDIACFYTGTEHTLTSVEKMLHVHYDACMKYHIGVLVEKSLIKINWFGGFSVHDLIEDMAKEIVRLESPDEPGNRSRLWFHEDIIQVLEDNTGTSAIKTIYLICENEVELDESAFKKMKNLKTLVIIIMKGGHFTKGPKYLPNSLRVVKWEGYPSEYLPQDFHPKKLAILTLRKSCITSLETDSLKKFLNVKILNFDEANCLTEIPDVSCLLNLEEFSFHNCNNLIKIHESVGLLDKLKVLSARGCTKLRRFPPIKLASLEQLDLSFCLNLKSFPEILGKIENITELVLEGIPIIDLPFSFQNLTHLQTLQLRCCGTFSLPRNLFMMPNLVVIIAWVLNGLIFPKQSEGEQTVILTVTSNVERLYLPYCRLSNDFFATSLTWFRNVKELILTGNNFTILPECIKEYHLLSELHVDDCKYLREVRGIPPNLEIFSALWCKSWTSTEMLLNQELHEAGSTMFKLPGSRIPDWFEHCSSGGSISFWFRNKFPAIAVCLVPDSMFVISSIYPIVIINGKESQLDSRNMNEYGGDHSLYVRPDHTYIFDLQKIIKFEDNLDEALLNKEWNHMEIMYKDKNNHSMFIESGIHVFKQKNRIEDIRFTDPTLEESTNLQA* 1054
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4285 1053 Gene3D - 350 429 IPR042197 -
Tpr4g4285 1053 Gene3D - 186 346 IPR027417 -
Tpr4g4285 1053 Gene3D - 430 504 IPR036388 -
Tpr4g4285 1053 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Tpr4g4285 1053 SUPERFAMILY "Winged helix" DNA-binding domain 420 530 IPR036390 -
Tpr4g4285 1053 Gene3D Ribonuclease Inhibitor 533 721 IPR032675 -
Tpr4g4285 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 444 IPR027417 -
Tpr4g4285 1053 PRINTS Disease resistance protein signature 216 231 - -
Tpr4g4285 1053 PRINTS Disease resistance protein signature 292 306 - -
Tpr4g4285 1053 PRINTS Disease resistance protein signature 385 399 - -
Tpr4g4285 1053 PRINTS Disease resistance protein signature 696 712 - -
Tpr4g4285 1053 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 1012 IPR044974 GO:0006952
Tpr4g4285 1053 SMART AAA_5 213 351 IPR003593 -
Tpr4g4285 1053 SUPERFAMILY L domain-like 535 885 - -
Tpr4g4285 1053 Pfam TIR domain 16 183 IPR000157 GO:0007165
Tpr4g4285 1053 Gene3D Ribonuclease Inhibitor 722 891 IPR032675 -
Tpr4g4285 1053 Pfam NB-ARC domain 206 415 IPR002182 GO:0043531
Tpr4g4285 1053 Gene3D - 12 185 IPR035897 -
Tpr4g4285 1053 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Tpr4g4285 1053 PANTHER ARCHAEAL ATPASE 26 1012 - -
Tpr4g4285 1053 SMART till_3 15 155 IPR000157 GO:0007165
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr4g4285 Tpr-Chr4 50002092 50011958 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4285 6 753 WRKY Transcription Factor Family AT4G12020 30.620 7.78e-82 291
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4285 - - gmx:100780257 1203.73