Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4284 ATGGCAGTGCCAGAATCTTCCTCTTCATCTTCCTTCAGTTATGGATTCACCTATGATGTGTTCCTCAGCTTTAGAGGATTAGACACTCGCTATGGTTTTACCGGAAATCTCTACAAAGCACTTCTTGACCAAGGAATCCACACATTCATTGACGATGAAGAGCTACAAAGAGGACATGAAATCACACCATCACTTTTAGAGGCAATTGAAGAGTCAAGAATTGCCATAATTGTACTTTCTAAAAACTATGCATCTTCATCATTTTGCTTACAAGAACTTGTCAAGATCCTTGACTGCATTAAGGGGAAAGGTAGATTGGTTTGTCCAATCTTTTATGATGTGGATCCTTCTGATGTGAGGAAGCAGACAGGATCTTACGGTGAAGCTTTAGCTATGCATGCAGAGAGATTCATTGATATCTTGCCAAAATGGAAGATAGCTTTGCGACAAGTAGCTAACTTGTCTGGCTGGCATTTCAAAATTGGGGATGGATATGAATATGAGTTTATTGGAAAGATTGTTGAACATGTTTCCAAGAAAATCAACCGTATGGCTTTACCCGTGGCTGACTACCCGGTTGGACTTGAGCCTCGAATGCTAGAAATAAATTCACTTCTTGATGCTGGGTCTGATGATGAGGTCAAAATGATCGGCATCCATGGAATTGGAGGAATAGGGAAAACTACACTTTCTATTGCGGTTTATAACATGATTGCCGACCAATTTGAAGCTTTGTGTTTTCTTGAAAATGTGAGAGAAAATTCAAACAAACACGGGTTACAACATCTCCAAAAGATTCTTCTTTCTGAAACACTTGGAGAGAAGAAAATTAAGTTATCAAGTGTCAAACAAGGAATTTCAATAATAAAACATAGACTCCAGCAGAAAAAAGTTCTTTTGATTTTAGATGATGTTGACAAAATAGAACAACTGGAGGCCTTGGTTGGAGGGTCTGATTGGCTTGGTTCCGGAAGCAGAGTTATTATTACAAGTCGAGACAAACATTTGTTTGAAAGTCATGGGGTTAACAGAACATATGAATTAAATGTGTTAGATGAGAAAGAGGCTCTTCAATTGCTTACTTGGAAAGCTTTTAAAGCAGAGAAATATCATCCTAGTTACTTGGATGTCATGAAACGCGTAGTAGCCTATGCTTCGGGACTTCCATTGGCTTTAACAGTAATGGGTTCCAATTTATTTGGAAAGAATATACAAGAATGGGAATCTGCATTACATCGATATGAAATCATTCCTAATAAAGAGATCCAAAATATACTCAAAGTAAGTTTTGATGCTTTGGAGGAAGATGAACAAAGTGTTTTTCTTGACATAGCTTGTTTCTATACAGGAACAAAACATACATTGACAAGTGTAGAAAAGATGCTTCATGTTCATTATGATGCTTGCATGAAATATCATATTGGAGTATTGGTTGAAAAATCTCTCATAAAGATTAATTGGTTTGGTGGATTCAGTGTGCATGACTTGATAGAAGACATGGCTAAAGAAATTGTTCGATTGGAATCACCAGACGAACCTGGAAAACGTAGTCGATTATGGTTTCACGAAGATATAATCCAAGTTTTAGAAGACAATACAGGAACTAGTGCGATTAAAACCATATATCTTATGTGTGAAAATGAGGTAGAATTGGATGAATCGGCCTTCAAGAAGATGAAAAACCTCAAAACCCTCATTATCGAAGGTAGCCATTTTTCCAAAGGACCCAAATATCTTCCAAATAGTTTAAGAGTAGTTGAATGGGAGGGATATCCTTCAGAATATTTACCTTATGATTTTCATCCAAAGAAACTTGCCATATTCAACTTACAAAAAAGTTGCATAACGTCACTCAAGTTGACTGACTCATTGAAAAAGTTCTTGAATGTTAAGATTTTGAATTTTGACGAAGCAAATTGTTTGACAGAAATACCTGATGCGTCTTCTCTCTTAAATTTAGAGGAATTTTCATTTGAAAATTGTGAGAATTTAATTTCAATTCACGATTCCGTCGGGTTATTGGATAAACTTAAAGTCTTGAGTGCTAGAGGTTGTAGTAAGCTTAGAAGATTTCCACCTATCAAATTGATGTCTCTTGAGCGACTCGATCTTTCATTTTGCATGAACCTCAAGAGTTTTCCAGAAATATTAGGGAAGATGGAAAATATAACAGATCTTGTGTTGGAAAAAACTCCGATAATTGAATTGCCATGTTCATTTCAAAATCTCACACATCTCCAAACATTAGAAGTACGTTGTTGTGGAATATTCAAGTTACCAAGTTGCATTCTCACGATGCCAAAACTGGTTAAGATAAGTGCTTGGGTATTAGAAGGGTGGCAATTTCCATTGGATAAAGTGACATCAACTGTGTCTTCAAATGTTGAATGTATAAGTCTTGCATTTTGCGAACTATCGAATGACTTTTTCCCAGCATGTCTCACATGGTTTGTTAATGTGAAAGAGTTAGACTTATCGAGGAATAATTTCACGATTCTTCCAGAATGCATTAAAGAATGTCATTTGTTAAAGAAGCTTTATTTGGATTATTGTCAATTTCTTCAAGAAGTTAGAGGAGTACCGCCAAACTTGGAAATATTTTCTGCACTATGGTGTAAATCTTGGACCTCTACAGATATGTTACTGCATCAGGAATTGCATGAAGCTGGAAGTACCATGTTTTATTTGCCAGGATCTAGAATTCCAGATTGGTTCGAGCACCGTAGTAGCAGAGGGTCAATTTCTTTTTGGTTTCGTAACAAGTTTCCTGCTATAGCTCTTTGTCTTGTTCCTGGTTCGATGTTTGCCACATCTCCAATCTATCCTATCGTGATCATCAATGGCAATAAATGTAAACTTGACTCTAGGAACAGGAATGAATACGGCGGTGATCATTATTTGCAGGTTGAATCAGATCATACATATATTTTTGATCTTCAAAAGATAAAGTTCGAAGATAATTTGGATGAAGCGATATTAAACAACGAATGGAACCACGTAGAGATTATGTATACGGATGCAAACAATCACTCAATGCTTATAGAAAGTGGAATCCATGTATTCAAACAGAAGAGTAGAATAGAGGACATTCGATTCACCAACCCTTGA 3108 0.3642 MAVPESSSSSSFSYGFTYDVFLSFRGLDTRYGFTGNLYKALLDQGIHTFIDDEELQRGHEITPSLLEAIEESRIAIIVLSKNYASSSFCLQELVKILDCIKGKGRLVCPIFYDVDPSDVRKQTGSYGEALAMHAERFIDILPKWKIALRQVANLSGWHFKIGDGYEYEFIGKIVEHVSKKINRMALPVADYPVGLEPRMLEINSLLDAGSDDEVKMIGIHGIGGIGKTTLSIAVYNMIADQFEALCFLENVRENSNKHGLQHLQKILLSETLGEKKIKLSSVKQGISIIKHRLQQKKVLLILDDVDKIEQLEALVGGSDWLGSGSRVIITSRDKHLFESHGVNRTYELNVLDEKEALQLLTWKAFKAEKYHPSYLDVMKRVVAYASGLPLALTVMGSNLFGKNIQEWESALHRYEIIPNKEIQNILKVSFDALEEDEQSVFLDIACFYTGTKHTLTSVEKMLHVHYDACMKYHIGVLVEKSLIKINWFGGFSVHDLIEDMAKEIVRLESPDEPGKRSRLWFHEDIIQVLEDNTGTSAIKTIYLMCENEVELDESAFKKMKNLKTLIIEGSHFSKGPKYLPNSLRVVEWEGYPSEYLPYDFHPKKLAIFNLQKSCITSLKLTDSLKKFLNVKILNFDEANCLTEIPDASSLLNLEEFSFENCENLISIHDSVGLLDKLKVLSARGCSKLRRFPPIKLMSLERLDLSFCMNLKSFPEILGKMENITDLVLEKTPIIELPCSFQNLTHLQTLEVRCCGIFKLPSCILTMPKLVKISAWVLEGWQFPLDKVTSTVSSNVECISLAFCELSNDFFPACLTWFVNVKELDLSRNNFTILPECIKECHLLKKLYLDYCQFLQEVRGVPPNLEIFSALWCKSWTSTDMLLHQELHEAGSTMFYLPGSRIPDWFEHRSSRGSISFWFRNKFPAIALCLVPGSMFATSPIYPIVIINGNKCKLDSRNRNEYGGDHYLQVESDHTYIFDLQKIKFEDNLDEAILNNEWNHVEIMYTDANNHSMLIESGIHVFKQKSRIEDIRFTNP* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4284 1035 SUPERFAMILY L domain-like 535 879 - -
Tpr4g4284 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 444 IPR027417 -
Tpr4g4284 1035 SMART till_3 17 154 IPR000157 GO:0007165
Tpr4g4284 1035 Pfam C-JID domain 896 1003 IPR045344 -
Tpr4g4284 1035 Gene3D Ribonuclease Inhibitor 529 717 IPR032675 -
Tpr4g4284 1035 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Tpr4g4284 1035 Gene3D - 185 346 IPR027417 -
Tpr4g4284 1035 SUPERFAMILY "Winged helix" DNA-binding domain 420 530 IPR036390 -
Tpr4g4284 1035 PRINTS Disease resistance protein signature 216 231 - -
Tpr4g4284 1035 PRINTS Disease resistance protein signature 292 306 - -
Tpr4g4284 1035 PRINTS Disease resistance protein signature 385 399 - -
Tpr4g4284 1035 PRINTS Disease resistance protein signature 694 710 - -
Tpr4g4284 1035 PANTHER ARCHAEAL ATPASE 28 1004 - -
Tpr4g4284 1035 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1004 IPR044974 GO:0006952
Tpr4g4284 1035 Gene3D - 13 184 IPR035897 -
Tpr4g4284 1035 Pfam TIR domain 18 183 IPR000157 GO:0007165
Tpr4g4284 1035 Gene3D Ribonuclease Inhibitor 718 874 IPR032675 -
Tpr4g4284 1035 Pfam NB-ARC domain 205 415 IPR002182 GO:0043531
Tpr4g4284 1035 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Tpr4g4284 1035 Gene3D - 350 429 IPR042197 -
Tpr4g4284 1035 Gene3D - 430 504 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4284 Tpr-Chr4 49994370 50000701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4284 12 846 WRKY Transcription Factor Family AT4G12020 31.445 1.19e-83 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4284 - - gmx:100780257 1225.31