Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4254 ATGAGGTGGTGCAGTGAAGCTATCTCATTATCGGGTGCACATGCACTCGCTCCTGTATCTTTACTCACCAACAAAACTGTTGCATTTCAATTTCAAAAGCCTTTTTTCTTCAAATTCAAATTCAACAACTCTTTTTCTTCTACATCTCTTATCCATCGGAACCCGTTGGCTGCTCAATTGCAACCGTCATGTTCAACGGAGGATGATTTTGATTTTGATTTTTTGGTTGTTAATTTCTATCATTTTGTGTTCATTAAAGATCCTCAACAAGAAGTTGCCAAACACCTCTCTTTCTTGGAATTGGAGGGTCTAGATATCCATGGAAGAATCTATTTGAATGAACAAGGGATTAATGCACAGTATAGTGGGCCATCAAAAGACGCTATGGTTTATGTCAACTGGATAAAAGAGGATGACAGGTTTTCCAACATCCTGGTTCAGATATCTCAATCAGAAATTGGACACGCCTTTCCATCATTGAAGTTGCGGTATAAGCCTTCATTAGTACAGTTTAAAAGTGACACATCAGATCTTCCAGTGCTTGATCCTTCAATGCGGGCAATACCTTTAGCACCTTCAGAATGGAGAGATAGATTAGAAGCCATCAATAAAAATGATCCGCATTCAAAAGATCATCCTAACAAAGATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGACATTGGACATTTTCGTGGGGCTCAACGACCTAATGTAGACTGCTTTAGGAGCACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGACCCTTTATCAAATGTAGATAAAGAAAATACAAACATATTGATGTATTGCACGGGAGGAATTCGATGTGATGTGTATTCTACAATACTGAGGCAGCATGGATTTCAGAATTTGTATACCCTTCAGGGAGGCGTTTCTAACTATATAAAGAACGAAGGTCCTGCAGAATGGATAGGAAATTTATTTGTATTTGACTCCCGATTATCTCTCCCTCCTCCTGTTTACCATCCTCAGGCCAATACTGAAGTTGGGACTCCGACTCCAACTTCAGTTTCTAGTGATGATAAGTTTGCAAAATGCTACATATGTAACTCGGGAGTCAGTGAACTGAGACACCGGAATTGTGCAAATCTTGACTGTAACTTGCTTTTTCTATGCTGCAAAAAATGTGTTAAGGATCTAAGAGGATGTTGTTGTTTGACTTGCACTACTGCGCCTAGGCTTAGACCTGTTTTAAATGGAGAGCACAGATACAAGAAATGGCACATCTATCGTGACATGGATTTGCAAGGCAATGCAAGAATTTCAACTTGA 1311 0.3944 MRWCSEAISLSGAHALAPVSLLTNKTVAFQFQKPFFFKFKFNNSFSSTSLIHRNPLAAQLQPSCSTEDDFDFDFLVVNFYHFVFIKDPQQEVAKHLSFLELEGLDIHGRIYLNEQGINAQYSGPSKDAMVYVNWIKEDDRFSNILVQISQSEIGHAFPSLKLRYKPSLVQFKSDTSDLPVLDPSMRAIPLAPSEWRDRLEAINKNDPHSKDHPNKDYILLDVRNGYEWDIGHFRGAQRPNVDCFRSTSFGLSQEEITASDPLSNVDKENTNILMYCTGGIRCDVYSTILRQHGFQNLYTLQGGVSNYIKNEGPAEWIGNLFVFDSRLSLPPPVYHPQANTEVGTPTPTSVSSDDKFAKCYICNSGVSELRHRNCANLDCNLLFLCCKKCVKDLRGCCCLTCTTAPRLRPVLNGEHRYKKWHIYRDMDLQGNARIST* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4254 436 Pfam Rhodanase C-terminal 318 402 IPR022111 -
Tpr4g4254 436 SMART rhod_4 191 313 IPR001763 -
Tpr4g4254 436 CDD RHOD_YceA 190 309 - -
Tpr4g4254 436 Gene3D - 183 340 IPR036873 -
Tpr4g4254 436 Pfam UPF0176 acylphosphatase like domain 76 166 IPR040503 -
Tpr4g4254 436 Gene3D - 64 169 - -
Tpr4g4254 436 ProSiteProfiles Rhodanese domain profile. 213 316 IPR001763 -
Tpr4g4254 436 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 73 431 - -
Tpr4g4254 436 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 73 431 IPR020936 -
Tpr4g4254 436 Pfam Rhodanese-like domain 215 308 IPR001763 -
Tpr4g4254 436 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 208 330 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4254 68 429 Sulfurtransferasese or Rhodanese AT1G17850 65.229 6.81e-177 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4254 - - mtr:MTR_3g006290 689.878