Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4252 ATGAAGCGTACGAGGAAATCTAATAGGGTTTCTTGGGCTCCTGGTTCCAATCTTTGTCAGGTAAAATTGTTCTTGTCTGATGATTACCCGTCAAAAGTTGGCATGAAATCAAAAGATAATCTTGAAGGAAAGGCATCGTCAATGTGGTGTTCTAGCACCAATGAATATGTTGATTTACCTCCTGGGTTTGAAAGCAGTCATTTCCCGAACCAATCAAAGGTTGAATTCTCCCACATTCCAAAGATAAAATGGGAATGTCCTCTCCCGTTTGTTTTCAGTTCTGCTTGGCTAGTTGCAGCTGGCGAAGAAAGTAGGGAGAAAGATTTTCAGAAGCTGAGAGAAATAAGAGTGCTTGAAGCAGTTTATCCCCGACACTCTGCCATTCCTCCTAGCCCTTCTGTTTCTTTAGATGTAGAAGACGAAGATTATGATGATAACCTTACTCCTCTCGTCCCTCTCATTCCCATCGAGGAGGAAGAGTCCATGCCTGCAGCAGTGAGCCCTCAACCCAATGGCCAGTCACAGAACTTGCATAAATACATGTCAGCACCAACTTCCTCTCGTACCATCTCCCCGGATGCTTGTGCAATGCCCTTAGCTGGGCTATCTTCTGGTTCAGTAGCTGACATAGCAGCAGCCTCTGATGTTGTGGCAGCCATCTTGAAGAGTAAGGAGCAAGGAGGCTTAATTGATATGGATCTACTGGTTAAAATATTTAATGACCCGAAAATGATTGAGAATTTAATCAGTGAACATGGATTGAAAACTGCTACCCCAAATTCGGTGGCTACAGCCACTTCTGGATTGAAAGCTGCTACTCCAAATTCCGTGGTTACAGCCACTTCTGGATTGAAAGCTGCTACCCCATCAGTTCCTATGTTTACATCTACACCTGATGCAGCAGCTTCTAGGAACACACACACTAGTTCTGTGGGTTTTTCTGGTTTGAGGCCTTCAACTCCATCAGTTTCATCTTTGAATCATACATCTGGTAAGCCAGAAACTCTGTTTGCTCCTGCAATTCCATCATATTCAATTGTGACTTCTGCATATGATAAGCCAGCAACTGCATCAGTTCCATTGTCTAGGCCGGTATCCGGTAAACCGGTATCCCCCTCCGCTTTTATGCCCACACCTACACCTGCATCTCATATGCCCAGACCTGTCAACAATGATTTTCACATGTCAAATGGAATGCCAACTGCTTTGAATGTGCAACCTCGACCAGATTCATTTCTGGCTTCTGGGGCGAATCGATCTGCATCTTTTACTTTTGCTTCCATATCTTCTAGTGAACAAAGCACAGTTCCATTGCCTCCTCCTACTGGGAACTTGCATACTGTTTTGAACCATACACAAACCACTGCTACTACAAAGCCTTATCAAACCAGTACAGGTTCGGCATCTTCTGTAAAGAAGGATGTCAACTATTATCTAAACCTCATTAGGCAACATGGTGCAGATGGACATGATATGCAGGACTCACAAATAGGTACTCGTCGTAGTAACTTCCAAGATAAGATATCGGTAAATAACAATAATCAAGGGGAAGTGAAATTCAAAAGCAAGAAACAATGCATTTACTTTAATAGCTCAAAGGGGTGCAGGAATGGTTCTGATTGCCCCTTTCAGCATGATGTTTCAGCTCAGTCAGAAGCTGGTAACTTCCTAGGGGGCAGGGATGCTAAAAGATTTAAATTGTGA 1704 0.4343 MKRTRKSNRVSWAPGSNLCQVKLFLSDDYPSKVGMKSKDNLEGKASSMWCSSTNEYVDLPPGFESSHFPNQSKVEFSHIPKIKWECPLPFVFSSAWLVAAGEESREKDFQKLREIRVLEAVYPRHSAIPPSPSVSLDVEDEDYDDNLTPLVPLIPIEEEESMPAAVSPQPNGQSQNLHKYMSAPTSSRTISPDACAMPLAGLSSGSVADIAAASDVVAAILKSKEQGGLIDMDLLVKIFNDPKMIENLISEHGLKTATPNSVATATSGLKAATPNSVVTATSGLKAATPSVPMFTSTPDAAASRNTHTSSVGFSGLRPSTPSVSSLNHTSGKPETLFAPAIPSYSIVTSAYDKPATASVPLSRPVSGKPVSPSAFMPTPTPASHMPRPVNNDFHMSNGMPTALNVQPRPDSFLASGANRSASFTFASISSSEQSTVPLPPPTGNLHTVLNHTQTTATTKPYQTSTGSASSVKKDVNYYLNLIRQHGADGHDMQDSQIGTRRSNFQDKISVNNNNQGEVKFKSKKQCIYFNSSKGCRNGSDCPFQHDVSAQSEAGNFLGGRDAKRFKL* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4252 567 ProSiteProfiles Zinc finger C3H1-type profile. 520 548 IPR000571 GO:0046872
Tpr4g4252 567 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 567 - -
Tpr4g4252 567 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 567 - -
Tpr4g4252 567 MobiDBLite consensus disorder prediction 295 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4252 Tpr-Chr4 49681767 49688949 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr4g4252 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4252 - - cam:101501407 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4252 4 49681767 49688949 Tpr4g4252 4 49681767 49688949 ECH