Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4241 ATGCAAGTTAACATGGATTTACTTCATCAAGCAAAAATCACACTAGAACCATTTCAAACATCTCTATTATTGATTCTCCCACTCACTTTAGTTCTACTACTAAATTTAGTATCCAAAACTCGAAAAAAAGCACCGTATCCACCGGGACCAAAAGGTTTACCCTTAATAGGCAACATGAACATGATGGACAAACTCACACATAGAGGTTTAGCAAATTTAGCTAAACTATATGGTGGTGTTTTGCACCTACGCATGGGATTTATCCACATGGTAGCAATTTCAAACGCGGAAGCCGCCCGTGAAGTGTTACAATTACATGACAACATATTCTCCAATCGCCCGGCAACAATAGCCATAAGTTACCTTACTTATAACCGTGCTGACGTGGTGTTCGCCCACTACGGTCCCTTTTGGCGTCAAATGCGGAAACTTTGTGTCATGAAACTCTTTAGCCGCAAACGTGTGGAGTCCTGGCAATCCGTTAGAGACGAAGTTGATGCGGTTATCACCAACATTAATGACAATGTGGGAAAGTCGGTTAACATTGGTGACATGGTTTTTAATTTAACCAAAAACATTATCTACCGCGCAGCTTTTGGGTCAAATTCAAATGAAGGACAAGATGAGTTTATTTCAATACTACAAGAGTTTTCGAAATTGTTTGTAGCTTTTAATATTGCGGATTATGTTCCTTTTTTGAGGGTGGTTGATCCTCAAGGTTTTAATGCTAGGCTTGTTAAGGCTAGAGGTGCTTTGGATTGTTTTATTGATAAGATTATTGATGAACATGTGGAGAAAAAGAGGAATATGAGCATTGGTTGTGGTGATGAAGATAGTGATATGGTTGATGAATTATTGGCTTTTTACGGTGATGAAGTTAAAGTGAGTAATGAATCGGATGATAACTCCATCAAACTCACTAGGGATAACATCAAAGGCATCATCATGGACGTGATGTTTGGAGGAACTGAATCGATAGCAGCAGCAATAGAATGGGCTATATCGGAGCTAATGAGAAATCCACAAGATCTAACGCGCGTGCAAGAAGAACTCGCCACCGTGGTTGGCTTAGACCGGCGGGTAGAGGAATCAGACATAGAGAAACTCACTTATCTAAAATGTGTCGTCAAAGAGACATTGCGTCTTCACCCGCCGGTTCCCCTTCTTCTCCATGAAACGGCAGAAGACGCAACAATTCGTAGTTATTTTGTCCCCAAGGGCTCGCGCGTGATGATAAATGTGTGGGCTATAGGCAGAGACAAAGACTCGTGGGAAGATCCAGAAGAATTTAAGCCTTCACGGTTTCTTAATTCAAGCGCACCCAATTTTAAAGGAAGTAATTTTGAGTTTATTCCATTCGGGTCAGGTCGAAGATCTTGCCCCGGGATGCAATTGAGCATGTATGCATTAGACTTGGCTTTGGCCCATTTACTTCATTGCTTTACGTGGGAGTTACCTAATGGGATGAAGCCGAGTGAAATGAATATGAATGATGTTTGTGGACTCAGTGCTCCTAGAGAGAGTCGACTCATTGTTGTTCCAGCTAAGCGTGTTGTGTGCCCTCTCTGA 1569 0.4168 MQVNMDLLHQAKITLEPFQTSLLLILPLTLVLLLNLVSKTRKKAPYPPGPKGLPLIGNMNMMDKLTHRGLANLAKLYGGVLHLRMGFIHMVAISNAEAAREVLQLHDNIFSNRPATIAISYLTYNRADVVFAHYGPFWRQMRKLCVMKLFSRKRVESWQSVRDEVDAVITNINDNVGKSVNIGDMVFNLTKNIIYRAAFGSNSNEGQDEFISILQEFSKLFVAFNIADYVPFLRVVDPQGFNARLVKARGALDCFIDKIIDEHVEKKRNMSIGCGDEDSDMVDELLAFYGDEVKVSNESDDNSIKLTRDNIKGIIMDVMFGGTESIAAAIEWAISELMRNPQDLTRVQEELATVVGLDRRVEESDIEKLTYLKCVVKETLRLHPPVPLLLHETAEDATIRSYFVPKGSRVMINVWAIGRDKDSWEDPEEFKPSRFLNSSAPNFKGSNFEFIPFGSGRRSCPGMQLSMYALDLALAHLLHCFTWELPNGMKPSEMNMNDVCGLSAPRESRLIVVPAKRVVCPL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4241 522 Pfam Cytochrome P450 47 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 13 522 - -
Tpr4g4241 522 PANTHER CYTOCHROME P450 84A1-RELATED 13 522 - -
Tpr4g4241 522 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Tpr4g4241 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 Gene3D Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4241 522 SUPERFAMILY Cytochrome P450 47 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4241 Tpr-Chr4 49550699 49571138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4241 54 522 Monolignol Biosynthesis Gene Families AT4G36220 69.979 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4241 K09755 - gmx:100807448 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4241 4 49550699 49571138 Tpr2g1064 2 12494065 12500052 PCT