Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4236 ATGAACAACAATAGTTTGGAATTAGAAGAGACTGTAAAAGAGTTGGGACAATACTTCAAAACAGGAAAAACAAAAAGTGTTACATGGAGGAAAAACCAGCTCCAAGCTATACTTAATCTTGTTCGTGAAAATGAAGATGCTATTTCTAAAGCTCTTTACCAAGATCTTGGGAAGCATCCTGTTGAAGCTTACCGCGATGAGCTTGGAGGAGTAGAAAAATCAGCTCAAAACTCTTTGGACAGTGTTGAAAAATGGATGGCTCCTACAAAGAGCAATATCCCTCTTCTTTTCTTCCCAGCAAAAGGAGAGGTATTGCCAGAACCACTTGGTGTAGTTCTCATTTTTTCTTCTTGGAACTTTCCAATCATGTTAGCATTGGATCCAATAATTGGAGCAATATCTGCTGGAAATGTTGTAGTCATTAAGCCATCAGACCAAGCTCCAGCATGCTCTTCTTTTCTTGCAAATACCCTTCCTCAATACTTGGACACTAATGCCATAAAGGTCATTGAAGGTGGTGGAGATGTCTGTGAACAAATATTGCTACATAAATGGGACAAAATATTCTTCACCGGAAGTCCACGTGTCGCAAGAATAGTAATGACTTCTGCTGCAAGGAATTTAACTCCTGTTACTTTAGAGCTAGGAGGAAAATGCCCTGCTATATTTGATCACCTTTCCAATCCTTCAGATTTTAAGATGGCAGTGAAAAGAATAGTAGGAGCAAAATGGGGAATCTGTAGTGGACAAGCATGTATAGGAATCGATTATTTGCTTGTTGAGGAGAAATACTCATCTGAAGTGATAGAACTATTAAAGAAGTTCATAAGAAAATTTTATGGTGACAACATGGTAGAGTCAAGGGTACTATCAAGAATAATAAACAAACAGCACTTTGAGAGATTATGTAACCTTCTTAAAGACCCTCTTGTTGCTGCTTCAATAGTTCATGGTGGTTCAATTGATGAAACAAACCTGTTTATTGAGCCAACAATCTTGTTAGATCCACCACTAGATGCTGAAATCATGACAGAAGAAATCTTTGGTCCTCTACTACCAGTGATCACAGTGAATAAAATTCAGGAAAGTATTGGATTTATAAACTCAAGGCCAAAACCTCTTACCATTTATGCATTCACCAAAGATGATACTTTCAAGAGAAAGATTGTAGCAGAAACTTCCTCTGGAAGTGTCATATTTAATGACACACTTGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGACAGAGTGGTTTTGGGAGGTACCATGGGAAATACTCATTTGACACATTCAGCCATGAAAAAGCTGTAATGCATAGACATCTTTGCCTTGAGATTGAGCCAAGGTATCCTCCATGGAATAAGTTCAAGCTAGAATTTATCAGATTGGCATACAGATTGAACTACTTTGGATTAGTACTTCACATGCTGGGATTGAAAAAACACAACTAG 1461 0.3771 MNNNSLELEETVKELGQYFKTGKTKSVTWRKNQLQAILNLVRENEDAISKALYQDLGKHPVEAYRDELGGVEKSAQNSLDSVEKWMAPTKSNIPLLFFPAKGEVLPEPLGVVLIFSSWNFPIMLALDPIIGAISAGNVVVIKPSDQAPACSSFLANTLPQYLDTNAIKVIEGGGDVCEQILLHKWDKIFFTGSPRVARIVMTSAARNLTPVTLELGGKCPAIFDHLSNPSDFKMAVKRIVGAKWGICSGQACIGIDYLLVEEKYSSEVIELLKKFIRKFYGDNMVESRVLSRIINKQHFERLCNLLKDPLVAASIVHGGSIDETNLFIEPTILLDPPLDAEIMTEEIFGPLLPVITVNKIQESIGFINSRPKPLTIYAFTKDDTFKRKIVAETSSGSVIFNDTLVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRHLCLEIEPRYPPWNKFKLEFIRLAYRLNYFGLVLHMLGLKKHN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4236 486 PANTHER ALDEHYDE DEHYDROGENASE 10 484 IPR012394 GO:0006081
Tpr4g4236 486 Pfam Aldehyde dehydrogenase family 8 440 IPR015590 GO:0016491
Tpr4g4236 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 17 438 IPR016162 GO:0016491
Tpr4g4236 486 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Tpr4g4236 486 SUPERFAMILY ALDH-like 7 455 IPR016161 GO:0016491
Tpr4g4236 486 PIRSF ALDH 1 482 IPR012394 GO:0006081
Tpr4g4236 486 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 10 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4236 Tpr-Chr4 49500601 49504936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4236 8 484 Aldehyde Dehydrogenase Gene Family AT4G36250 61.006 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4236 K00128 - gmx:100809812 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4236 4 49500601 49504936 Tpr4g4236 4 49500601 49504936 ECH