Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4232 ATGGGGTGGATTATAGGATTATGGTCTTTGATGGGTATTTTTTTATGTTGGTGGTATCTATGTGTGAAGAAGGAGAATAAAGTGATGAAGAAAGGAAAAATTCCAAAAGGGAATAAAGGTTGGCCTTTACTTGGAGAGACCCTTGATTTCATTGCTTGTGGATACACCTCTAATCCGGTTAGCTTCATGGAAAAACGCAAGTCTTTGTATGGCAATGTGTTCAAGACAAGCATTTTAGGAACGGGTGTAATTGTGTCCACGGATCCAGAAGTGAATAAGGTGATTCTACAAAATCAAGGGAATATCTTTGTCCCTGCTTACCCAAAATCAATTAGAGAACTAATGGGAGAACACTCTATACTACAAATGAATGGAAACATGCATAGGAAAATTCATTCACTCCTTGGAGGATTTATGAGATCCCCACAATTCAAAGCTAGAATCACAAGAGATATTGAGTATTCTGTCAAACAATGTTTAGCTACTTGGACACATCAACCAACAATATATGTTCAAGATCAAGTTAAAAAGATTACATTTACTATTTTGGTGAAAGTTCTGATGAGCATTGATCCTGGTGAAGATTTATACATGTTAAAGAGAGAATTTGAAGAGTTCATCAAAGGATTGATTTGCTTGCCAATTAAATTTCCAGGAACAAGACTATATAAATCCTTGAAGGCTAAGGAGAGAATGATGAAAATTGTGCAGAGAATAATAGAAGAAAGGATTAATTATTATAAGAATAATAAGGATTGTGTGACAAATGATGTAGTGGATGTACTCTTACAAGATAAAGGTGACTCTAACACAATTCCTAATATATGGTTGAAAAATATGAGTGAGAATATTATTGAGATGATGATTCCTGGGGAAGAGACTCTTCCTACAGCTATGACCATGGCTGTCAAGTTTCTTAGTGACTCTCCTCTTGCTCTATCGAAATTAGTGGAAGAGAACATGGAATTGAAGAGGAACAAGAATTGTTCTGATGGTTATGCATGGACAGACTACCTCTCACTACAATTTACTCAAAATGTAATCAGTGAAACTCTTAGAATGGCAAATATTGTCAATGCTATTTGGAGAAAAGCTATCAAAGATGTAGATATTAAAGGGTACCTAATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACATCTGTTCATTTAGATGGCATGAACTATGAAAAACCATTTGAGTTTGATCCATGGAGATGGGAGAAAACTGAAGCTGGGACTAGAAACAATTGTTTTACACCATTTGGTGGTGGACAAAGATTGTGTCCAGGGATAGAACTCTCTAGGCTAGAGCTCTCTATTTTCCTTCATCATTTTGTTACAACTTACAGATGGGTTGCTGAAAAAGATGAAATCATTTACTTTCCAACAGTAAAGATGAAAAGGAAGCTCCCAATTAGTGTGACAAGACAACCCTAA 1440 0.359 MGWIIGLWSLMGIFLCWWYLCVKKENKVMKKGKIPKGNKGWPLLGETLDFIACGYTSNPVSFMEKRKSLYGNVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSIRELMGEHSILQMNGNMHRKIHSLLGGFMRSPQFKARITRDIEYSVKQCLATWTHQPTIYVQDQVKKITFTILVKVLMSIDPGEDLYMLKREFEEFIKGLICLPIKFPGTRLYKSLKAKERMMKIVQRIIEERINYYKNNKDCVTNDVVDVLLQDKGDSNTIPNIWLKNMSENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLVEENMELKRNKNCSDGYAWTDYLSLQFTQNVISETLRMANIVNAIWRKAIKDVDIKGYLIPKDWCVVASLTSVHLDGMNYEKPFEFDPWRWEKTEAGTRNNCFTPFGGGQRLCPGIELSRLELSIFLHHFVTTYRWVAEKDEIIYFPTVKMKRKLPISVTRQP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4232 479 Pfam Cytochrome P450 35 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Tpr4g4232 479 Gene3D Cytochrome P450 23 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4232 479 PANTHER CYTOCHROME P450 26 6 475 - -
Tpr4g4232 479 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 6 475 - -
Tpr4g4232 479 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4232 Tpr-Chr4 49469438 49480295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4232 33 451 Cytochrome P450 AT3G13730 52.133 1.31e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4232 K12637 - gmx:100812489 820.846