Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4224 ATGGAAGCAACCAAGCACCGCCAGAAGTTGCAATGGGAGTACGGCGTCGCCACCTTAGCTTCCAGATTCTCCACCGTAACCATCAATCATCCCCTCGACGTTGTCCAAACTAGGTTTCAAGTTAACGATGGTCGACGACTCCTCTCTCAAATTCCTAGATACAACAACACCGCTCACGCCATTTTCACCATTGCTCGCTTAGAGGGATTGAGAGGGCTATATGCAGGCTTTCTTGCTGGGGCTGTTGGGTCAACTATTTCATCGGGTTTAGGACTCTTATACTATGTCAAAGCTAAACAAAGACATGCTATTGCTATGAGCAGTGAGGAGAAGTATATTCCAGATCTTGCCTCAGCTATGGAAGCAGGAGCTTTGGTTTGCTTGTGCAGAAATCCTTTTTCGCTAGTGAAGACAAGACTGCAGCTTCAGACACCTCTTCATCAGGCACGGCCATATGCTGGGCTATATGATGCATTTAGGACCATAAAGAGGGAAGAAGGATTTAGTGCACTTTTCAGAGGGATTGTTCCTAGTTTATTTATGGTCTCTTATATTGCAATTCACGTCACGGTATACGAGGAGCTTCGTAAAACTATTGTCAATTTGAAGACCAAAGGAAGTAAAATACAACATCAAAACCCTGATCAAATCTTGAATTCTGTTGATTTTGCTGTTCTTGGAGCAACATCAAGAGTTGCTGCAATATTCCCAACCTATCCATTTCAGGTTATACGGACTCGTTTGCAGCAACGACCTGACAGTGATGGGATACCAAGATATAGAAACAGTTGGCATATTGTCAAAGAAATTGCAAGATTTGAAGGTGTCCGAGGATTCTACAAGGGAATCACTCCGAACCTTTTGATAAACATTCCTGTTGCTTCAATGACATTTATTGTTTATGAAAATGTTCTAAAATTACTTAAACTGGCTAAAAGGAATGACTGA 948 0.4219 MEATKHRQKLQWEYGVATLASRFSTVTINHPLDVVQTRFQVNDGRRLLSQIPRYNNTAHAIFTIARLEGLRGLYAGFLAGAVGSTISSGLGLLYYVKAKQRHAIAMSSEEKYIPDLASAMEAGALVCLCRNPFSLVKTRLQLQTPLHQARPYAGLYDAFRTIKREEGFSALFRGIVPSLFMVSYIAIHVTVYEELRKTIVNLKTKGSKIQHQNPDQILNSVDFAVLGATSRVAAIFPTYPFQVIRTRLQQRPDSDGIPRYRNSWHIVKEIARFEGVRGFYKGITPNLLINIPVASMTFIVYENVLKLLKLAKRND* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4224 315 Gene3D Mitochondrial carrier domain 16 314 IPR023395 -
Tpr4g4224 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 310 IPR044712 GO:0006862|GO:0055085
Tpr4g4224 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 198 IPR018108 -
Tpr4g4224 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 101 IPR018108 -
Tpr4g4224 315 SUPERFAMILY Mitochondrial carrier 13 303 IPR023395 -
Tpr4g4224 315 Pfam Mitochondrial carrier protein 13 100 IPR018108 -
Tpr4g4224 315 Pfam Mitochondrial carrier protein 225 309 IPR018108 -
Tpr4g4224 315 Pfam Mitochondrial carrier protein 110 200 IPR018108 -
Tpr4g4224 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 307 IPR018108 -
Tpr4g4224 315 PANTHER BNAA09G07970D PROTEIN 10 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4224 Tpr-Chr4 49347721 49353990 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4224 132 315 Chloroplast and Mitochondria Gene Families AT2G47490 27.660 3.04e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4224 K15115 - gmx:100809599 406.757