Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4221 ATGTCAACGGGATCGCCCAAGCGCCAACAATGGCAATGGGAAAACGCCACCGCCGGAGCCGCCGCAGGATTCGCCACAGTCGCTGTTATGCATCCCCTCGACGTTGTCCGAACTAGGTTTCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACCGCTCATGCCATTTTCACCATTACTCGCACCGAGGGATTAAGAGGGCTATATGCTGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATATCATGGGGTTTATATTTCTTTTTCTATGACAAAGCTAAACAAAGATATGCTAGGAGCAGAGAGGAGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCGGAAGCAGGAGCTTTGGTTTGCTTGTGCACAAATCCTGTTTGGGTAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCACCAGACACGGCCATACTCTGGGCTATATGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCCCTTTACAGGGGGATTGTTCCAGGTTTATTTCTGCAGGTCTCTCATGGTGCTATTCAGTTCACAGCTTACGAAGAGCTTCGTAAAACTATTATTGATTTGAAGAGCAAGAGAAGTGAAACACAACATCAAAACCCTGATCAACTGTTGAATTCTGTTGATTATGCGGTTCTTGGAGCAACATCAAAAGTTGCCGCAATACTTCTAACATATCCATTTCAGGTTATACGGTCTCGTTTGCAGCAACGGCCTGGTGGTGATGGGATACCAAGATATATGGACAGTTGGCATGTTGTGAAACAAACGGCACGATTTGAAAGTGTCCGAGGTTTTTACAAGGGAATCACGCCAAACCTCTTGAAAAATGTTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTCTAAAACTACTTAAACTGGCTAGAAGGAATGACTGA 948 0.4473 MSTGSPKRQQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAIFTITRTEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARSREEKLSPGLHLASAAEAGALVCLCTNPVWVVKTRLQLQTPLHQTRPYSGLYDAFRTIMREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKTIIDLKSKRSETQHQNPDQLLNSVDYAVLGATSKVAAILLTYPFQVIRSRLQQRPGGDGIPRYMDSWHVVKQTARFESVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKLARRND* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4221 315 Gene3D Mitochondrial carrier domain 100 314 IPR023395 -
Tpr4g4221 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 307 IPR018108 -
Tpr4g4221 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Tpr4g4221 315 Coils Coil 192 212 - -
Tpr4g4221 315 SUPERFAMILY Mitochondrial carrier 12 303 IPR023395 -
Tpr4g4221 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Tpr4g4221 315 PANTHER BNAA09G07970D PROTEIN 10 310 - -
Tpr4g4221 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 310 IPR044712 GO:0006862|GO:0055085
Tpr4g4221 315 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Tpr4g4221 315 Pfam Mitochondrial carrier protein 221 309 IPR018108 -
Tpr4g4221 315 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4221 Tpr-Chr4 49290336 49303102 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4221 32 308 Chloroplast and Mitochondria Gene Families AT2G47490 37.676 1.57e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4221 K15115 - gmx:100809599 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4221 4 49290336 49303102 Tpr4g4221 4 49290336 49303102 ECH