Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4210 ATGTGGAATCTTTTGAGGGAAGAACTAGCATTCGTAGGGCAAAACTATTATGACATAACCATAGTCTTATTTATCTCTATAGGATTAACATATTTTGCTTCAAGAGCATGGAAAAGAGCTAAAACAAATAGAGAAGATATCCCTGGTCGACTTGGATTACCTCTTATTGGGGAGACTTTTTCTTTTCTTTCAGCCACTAATAGTACAAGAGGATGCTATGATTTTGTTAGACTTAGACGATTATGGCATGGGAGATGGTTCAAGACAAGGCTATTTGGCAAGGTCCACATATTTATTCCTAATCCTGAAGGTGCAAGGACAATATTTGCTAATGACTTTGGTCTATTCAACAAGGGTTATGTAAAATCAATGGCAGATGCCGTGGGAAAGAAAAGCTTATTATGTGTACCTGTTGAGAGCCACAAAAGAATAAGGCGTCTTCTATCTGAACCATTCTCCATGACTTCCCTATCTGCATTTATCACAAAATTTGACAAATTGTTGTGTGGAAGACTTCAAATACTAGAAGACAGCGGGAAGAGTTTCAAGGTGTTGGACTTCAGTATGAAGATGACATTTGATGCAATGTGTGGTATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATCGAGAAAGACTGCACTGATGTCTCTAATGCCATGTTGTCTTTCCCAGTCATGATTCCTGGAACCAGATACTATAAAGGCATCATGGCTCGTAAAAGGCTCATGGAAACCTTCAGAGAGATCATTGCTAGACGTAGGAGGGGAGAAGAGTCTACAGCGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTACCAGCTGATCAAAAGCTTGATGACTCAGAGATTATGGATAATCTTTTGACATTGATAATTGCTGGACAGACTACTACAGCAGCAGCAATGATGTGGAGTGTAAAATTTCTACATGACAACAGAGATGCACAGGATATACTCAGGGAAGAACAATTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAATCAGGAAGATATCAACAACATGCGTTATGGTTTGAAGGTAGTTAAGGAAACGCTGAGAATGTCTAATGTCCTATTATGGTTTCCTCGCGTTGCACTTAACGACTGTACAATTGAAGGGCATGAAATAAAGAAAGGTTGGCATGTTAACATCGATGCAACTTGTATACATTACGACTCAGATCTTTTCATTGATCCATTGAAATTTAACCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTCATACCTTTTGGATCAGGACCTAGGACTTGCCTTGGGATGAATATGGCAAAAGTGACAATGTTGGTCTTTTTACACAGATTAACTAGTGGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGAAGTGGCTGTCCAATAACGTTGAAGTCCATAAGCAGGAGCATGCCAGAGGCATAA 1479 0.3969 MWNLLREELAFVGQNYYDITIVLFISIGLTYFASRAWKRAKTNREDIPGRLGLPLIGETFSFLSATNSTRGCYDFVRLRRLWHGRWFKTRLFGKVHIFIPNPEGARTIFANDFGLFNKGYVKSMADAVGKKSLLCVPVESHKRIRRLLSEPFSMTSLSAFITKFDKLLCGRLQILEDSGKSFKVLDFSMKMTFDAMCGMLMSITEDSLLRQIEKDCTDVSNAMLSFPVMIPGTRYYKGIMARKRLMETFREIIARRRRGEESTADFLQSMLQRDSLPADQKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNRDAQDILREEQLSLTKMKPEGASLNQEDINNMRYGLKVVKETLRMSNVLLWFPRVALNDCTIEGHEIKKGWHVNIDATCIHYDSDLFIDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSGYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSISRSMPEA* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4210 492 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 484 - -
Tpr4g4210 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Tpr4g4210 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 Pfam Cytochrome P450 52 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PANTHER CYTOCHROME P450 26 20 484 - -
Tpr4g4210 492 SUPERFAMILY Cytochrome P450 38 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4210 492 Gene3D Cytochrome P450 37 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4210 Tpr-Chr4 49215521 49222459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4210 39 457 Cytochrome P450 AT1G19630 45.519 3.63e-125 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4210 - - gmx:100789430 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4210 4 49215521 49222459 Tpr4g4210 4 49215521 49222459 ECH