Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4171 ATGGAACACACCGACGAATCTGTTGACGTTGAGTCCAGAGACCTTCATTCCACTAAAGGTACTGATACGTATGATTTAGAATCGAATGCCGACGAGGATGACAGTTATTCAGGATCCAGTGGGGATGAAAGGTCAGAGACTGAAAGTTCAGAGACTGGCGAAGATGCATCTGATAATATTGGAGCTGCAGTTCATAGTGAGGTAAATTTTGATTCAATTACTTCTGATGAGATTCGAGCCATGGAATTTGCTACTGTTAGTGAAGCTTATGAATTTTATTACCGGTATGGTAAATGTAAGGGTTTTGCTATTAGGAAAGCTTCTAGTAGGATAAAAGAGTTAGATGGTAATAAAGTAACACAAATGAAGCAGTTTGTTTGCAACAGACATGGTTTAAGAGAGAAGAAACATTTAACCAGGTTAGATAGGAAAGTAGAACATAGACGTTTGAACCGTACAAATTGTGAAGCTAGGTTTCGTGTGCAATACAGAAAACAAAAGGATAGATATGTAGTTACTGCTTTCGTAGAGTGTCATAACCATGAATTAACCCCAGCTAGGTTTGTTCACCTGCACCCTGTTTATCGTAAAATATCTGAAGCAGATAAGGCTCAGATTGATGGTCTTCAAACACGTGGAATTAGAACTTGTCATATAATGGGGTACATGATTGCCCAGAAGGGTGGATATGCTAGTGTTGGATTTACAAAGAAAGATTTGTACAATTATTTTGATAAAAAAATGCGTGAGTGTATTAAAGATGGTGATGTTGTCGCTTCTTTAAATTATCTTAATGTAAAGTCGTCTACTGATCCCATGCTATATGCTGAGTATGCCGTCGACAATAGTAATGGACGAATGAGGGTGTAA 870 0.3793 MEHTDESVDVESRDLHSTKGTDTYDLESNADEDDSYSGSSGDERSETESSETGEDASDNIGAAVHSEVNFDSITSDEIRAMEFATVSEAYEFYYRYGKCKGFAIRKASSRIKELDGNKVTQMKQFVCNRHGLREKKHLTRLDRKVEHRRLNRTNCEARFRVQYRKQKDRYVVTAFVECHNHELTPARFVHLHPVYRKISEADKAQIDGLQTRGIRTCHIMGYMIAQKGGYASVGFTKKDLYNYFDKKMRECIKDGDVVASLNYLNVKSSTDPMLYAEYAVDNSNGRMRV* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4171 289 MobiDBLite consensus disorder prediction 1 62 - -
Tpr4g4171 289 MobiDBLite consensus disorder prediction 37 51 - -
Tpr4g4171 289 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 215 - -
Tpr4g4171 289 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 215 - -
Tpr4g4171 289 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g4171 289 Pfam FAR1 DNA-binding domain 91 184 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4171 Tpr-Chr4 48713822 48715408 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g4171 FAR1 3.3e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4171 - - ccaj:109792835 263.462