Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4153 ATGCTGAAGAAACATAGGCATGGAATGATTTTCAAAATGCCGAAACTGAAAGACCAAGGTGCACTGAGTGAGGAGCTATCATCCACAGAAGAAATATCTTCATCGAAACTTTCCCACGAGAAGTATTTGTCGGTAACATTTGCATTTGTGTCTGACATTTTACATACTTTTGCTGTATTAAAGACGGCATTTCTACAATCGGGAAGGATGCTAAATCAAAGGAAAAGGCGGATTCAAGGGAAAGGATTTTCCATTGATACATTGATAAATCTTTCATCCAACCTTCCCATCTCCACTAGGACAGTCCAAACCATTGTGGAAGTCGAAGCCTTTGCCCTAAAAGCCGACGATCTGAAGTTTGTGGCATCTCAGTTCCGACGCCTTCACAGCAAGCAGCTGAGCCACACTTTTAGATTCTACTCGCAACAATGGCGCACATGGGCCACATGTTTTATACAAGCTGCATGGCGGCGCTATAGCAAGAAGAAGCTTGAAGAGTCTCTTGTTGAAGAGGAGAACAGGCTGAAAGATGCATTGGCAAAGGCTAGTGGTAGCTCAGGAAGTCTAAATGCCCTCAGATTATTGCGGCGTAGTGGCACCGCAAGGAAGACAAGGATGTCAGAGAGAATACCAGCTATGTTACTTCAGAAGCCTGAAGAACCTGACTTTACCGAAGAACAATAG 684 0.4401 MLKKHRHGMIFKMPKLKDQGALSEELSSTEEISSSKLSHEKYLSVTFAFVSDILHTFAVLKTAFLQSGRMLNQRKRRIQGKGFSIDTLINLSSNLPISTRTVQTIVEVEAFALKADDLKFVASQFRRLHSKQLSHTFRFYSQQWRTWATCFIQAAWRRYSKKKLEESLVEEENRLKDALAKASGSSGSLNALRLLRRSGTARKTRMSERIPAMLLQKPEEPDFTEEQ* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4153 227 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 91 225 - -
Tpr4g4153 227 Coils Coil 161 181 - -
Tpr4g4153 227 Gene3D Jelly Rolls 59 127 IPR014710 -
Tpr4g4153 227 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 91 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4153 Tpr-Chr4 48553611 48554811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4153 92 226 Ion Channels AT5G53130 74.150 9.25e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4153 K05391 - gmx:100815774 208.379