Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4150 ATGTCTAACTCACACATAATTTTCTGTTTTCTTTCTTGCATTCTTGCTCTCACTTTCATCTTCATTTTTTTCATCAAAAGAAAAAAAACAAAGTTTAATCTTCCACCTGGAAAAATGGGGTGGCCCTTTATTGGAGAAACCATTGGTTATTTGAAGCCTTATTCTGCCACCACAATGGGAGAATTTATGGAAAATCACATAGCAAGGTATGGTACAATTTACAAGTCAAAATTGTTTGGAGGACCAGCTATTGTATCAGCAGATGCAGAATTTAACAAATTCATATTACAAAATGATGGAAAATTATTTGAGTGTAGCTATCCTAAAAGCATTGGTGGAATACTTGGAAAATGGTCAATGTTGGTTTTAGTAGGTGACATGCATAGGGACATGAGGAATATTTCACTAAACTTTATGAGCTATGCTAGGCTTAAAACACATTTTTTGAAAGATATAGAGAATCACACTCTTTTGGTTCTAAGTTCTTGGAAACAAAATTGTACATTTTCAGCTCAAGGTGAAGCAAAAAAGTTCACCTTCAATTTGATGGCCAAACAAATTATGAGTTTGGATCCAGGGAATCTTGAGACAGAACAGTTGAAAAAAGAGTATGTCTCTTTCATGAAAGGTGTTGTTTCAGCTCCTTTAAATTTGCCAGGAACTGCATACAGGAAAGCATTAAAGTCTAGGAATACCATATTGAAGTTCATAGAGAGGAAAATGGAAGAAAGAAGGAAGAGAAACCAAGAAGGAAAAAAAGGGTTGGAAGAAAATGATCTTCTAAATTGGGTTCTAAAGCATTCAAATCTTTCCAATGAGCAAATTCTTGACTTGATTCTGAGCTTGCTTTTTGCTGGACATGAAACTTCATGTGTAGCTATATCTCTAGCTATTTATTTTTTGCCTGGTTGTCCTCAAGCCATACATCAATTAAGGGAAGAACATAGAGAAATAGCCAGATCCAAGAAGAAAGCAGGGGAGGTTGGATTAACTTGGGATGATTATAAAAGAATGGAATTTACTCATTGTGTTGTGAATGAAACACTACGGTTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATCAAAGATGTTCAGTACAAAGGTTATGACATTCCATGTGGATGGAAAGTACTTCCAGTGATTTCAGCTGTGCATTTGGATCCTTCAAATTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGGGCAATAGTAAAAGTGGAAATTGTGCAAACACAAGCAATAATTTCATGCCATTTGGAGGAGGACCAAGGCTATGTGCAGGATTAGAGTTAGCTAAACTTGAAATGGCTGTTTTCATTCACCATATTATCCTCAACTACAATTGGAACTTGGTCGATGTTGATCAACCTGTTGTATACCCTTTTGTTGATTTTCCTAAAGGTTTACCTATTAGAGTCCAAAGCCAATGCCACTCTTTAATATGA 1458 0.3615 MSNSHIIFCFLSCILALTFIFIFFIKRKKTKFNLPPGKMGWPFIGETIGYLKPYSATTMGEFMENHIARYGTIYKSKLFGGPAIVSADAEFNKFILQNDGKLFECSYPKSIGGILGKWSMLVLVGDMHRDMRNISLNFMSYARLKTHFLKDIENHTLLVLSSWKQNCTFSAQGEAKKFTFNLMAKQIMSLDPGNLETEQLKKEYVSFMKGVVSAPLNLPGTAYRKALKSRNTILKFIERKMEERRKRNQEGKKGLEENDLLNWVLKHSNLSNEQILDLILSLLFAGHETSCVAISLAIYFLPGCPQAIHQLREEHREIARSKKKAGEVGLTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAIKDVQYKGYDIPCGWKVLPVISAVHLDPSNFDQPQHFNPWRWQGNSKSGNCANTSNNFMPFGGGPRLCAGLELAKLEMAVFIHHIILNYNWNLVDVDQPVVYPFVDFPKGLPIRVQSQCHSLI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4150 485 PANTHER CYTOCHROME P450 90B1 17 457 - -
Tpr4g4150 485 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 Pfam Cytochrome P450 35 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PANTHER CYTOCHROME P450 26 17 457 - -
Tpr4g4150 485 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 Gene3D Cytochrome P450 25 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g4150 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4150 Tpr-Chr4 48509810 48519974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4150 26 409 Cytochrome P450 AT3G50660 71.852 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4150 K09587 - gmx:100789515 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4150 4 48509810 48519974 Tpr4g4150 4 48509810 48519974 ECH
Tpr2g0975 2 11683208 11690409 Tpr4g4150 4 48509810 48519974 PCT