Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4136 ATGGGGACTAAGGAAGATAGCACAACTAAACCTTCTAAATCATCTTCATCAACTCAGGAGGTACCAACAGTACCACCACCATATCCAGATTGGTCAAATTCCATGCAGGCCTACTATAATCCTGGAGCCGCTCCGCCTCCCTATTATGCCTCAACTGTTGCTCCGCCAAACCCCCATCCGTATATGTGGGGAGGCCAGCATCCTATGATGGCGCCATATGGGACTCCAGTCCCGTATCCTGCTATGTACCCTCCTGGAAATATCTATGCTCATCCTAGCATGGTAGTGACTCCAAGTGCTATGCACCAAACTACAGAGTTTGAAGGCAAGGGACCTGAGGGAAAGGATAAAGATTCATCTAAAAAATCGAAGGGCACTTCTACTAATACGAGTGCCAAAGCAGGAGAGAGTGCAAAGACAGGCTCAGGTTCAGGCAATGATGGCTTTTCACAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGGCAGTGATGAGAACCAACAGGAATCGGCTAGAAACAAGAAGGGGGGCTTTGACCTCATGCTTGTTAATGGAGCAAACGTACAGAACAATACCACTGGACCCATTTCTCAATCGCCTGTTCCCGGAAATCCTGTTGTCTCGATGCCTGCTACTAATCTTAATATTGGAATGGATTTATGGAATGCATCTCCTGCTAGTGCTGAAGCCGCCAAAATGAGACACAATCAATCTAGTGTTCCCGGAGCTGGTGAACAATGGATGCAACAAGATGATCGTGAGCTGAAAAGACAGAAGAGAAAACAGTCTAATCGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGCTACAGAAGAGGGTGGAGGCGCTGGGAGGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAAACTTTCTGAGGAGTGTGAGAAGCTTACATCTGAAAACAATTCTATCAAGGAAGAGTTGGAACAATTGTGTGGGCCGGAAGTAGTTGCTAATCTTGAATGA 1008 0.4673 MGTKEDSTTKPSKSSSSTQEVPTVPPPYPDWSNSMQAYYNPGAAPPPYYASTVAPPNPHPYMWGGQHPMMAPYGTPVPYPAMYPPGNIYAHPSMVVTPSAMHQTTEFEGKGPEGKDKDSSKKSKGTSTNTSAKAGESAKTGSGSGNDGFSQSGESGSEGSSNGSDENQQESARNKKGGFDLMLVNGANVQNNTTGPISQSPVPGNPVVSMPATNLNIGMDLWNASPASAEAAKMRHNQSSVPGAGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENRTLREELQKLSEECEKLTSENNSIKEELEQLCGPEVVANLE* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4136 335 SUPERFAMILY Leucine zipper domain 256 312 IPR046347 GO:0003700|GO:0006355
Tpr4g4136 335 MobiDBLite consensus disorder prediction 228 278 - -
Tpr4g4136 335 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Tpr4g4136 335 Gene3D - 256 312 - -
Tpr4g4136 335 PANTHER G-BOX-BINDING FACTOR 1 1 335 - -
Tpr4g4136 335 SMART brlzneu 253 317 IPR004827 GO:0003700|GO:0006355
Tpr4g4136 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 260 275 IPR004827 GO:0003700|GO:0006355
Tpr4g4136 335 MobiDBLite consensus disorder prediction 124 168 - -
Tpr4g4136 335 MobiDBLite consensus disorder prediction 108 123 - -
Tpr4g4136 335 MobiDBLite consensus disorder prediction 101 178 - -
Tpr4g4136 335 MobiDBLite consensus disorder prediction 1 21 - -
Tpr4g4136 335 MobiDBLite consensus disorder prediction 232 246 - -
Tpr4g4136 335 Coils Coil 266 321 - -
Tpr4g4136 335 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 335 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr4g4136 335 CDD bZIP_plant_GBF1 258 308 IPR045314 GO:0003700|GO:0006355
Tpr4g4136 335 Pfam bZIP transcription factor 254 315 IPR004827 GO:0003700|GO:0006355
Tpr4g4136 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 255 318 IPR004827 GO:0003700|GO:0006355
Tpr4g4136 335 MobiDBLite consensus disorder prediction 1 29 - -
Tpr4g4136 335 Pfam Disordered region downstream of MFMR 116 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4136 Tpr-Chr4 48344640 48350431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4136 1 335 bZIP Transcription Factor Family AT4G36730 53.254 3.27e-104 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr4g4136 MFMR_assoc 8.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4136 K09060 - gmx:778191 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4136 4 48344640 48350431 Tpr4g4136 4 48344640 48350431 ECH