Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4122 ATGGTTTCTTCCTCCATTCCAGATCACACACTATTTCTTGCATTCATGTTCTTTTCTGCCACACTTATGCTACTTCAATTGCCACAAACCAATGGAACAAATTTCTCATACCCTTTAAATTCCACTCCTTCCTATGACACATATGTTGCATACTCTGCTCAGTCTCCAAATTTTTTAACCCTCACAAGCATATCTGATATTTTTGACACCAGTCCTCTATCCATTGCAAGAACAAGCAACATAAAAGATGAAAATATGAACCTCATTCCAGGCCAGCTTTTGCTGATACCTATAACTTGTGGTTGCAGTGGAAATGGAAACTACTCTTTTGCCAATATTTCACACTTGATCAAACAAGGTGAAAGTTTCTATTACCTTTCAACCATTTCATATCAGAATCTCACTAATTGGATGACAGTGGAAGATTCAAACCCAAACTTGAATCCATATATGTTGACAGTAGGCACCAAAGTAATCATTCCTATATTCTGTAGCTGCCCTTCAAAAGGGATAGACTTAGAGTACTTGATTACTTATATATGGAAGCCTAATGACAATCTTACCCTTGTAGCTTCCATGTTTGGTGCATCACCACATGACATAATCACTGCAAATGCAAACAAATTTGGTCAAAACTTCACTGCTGCAGCCAACCTTCCAGTTTTTATCCCAGTGAAAAACTTACCAGCTCTTTCTCAATTATATTCTTCACCGGAAAGAAAAAGAACTAATCATTTTCAGATTATCATTTCCATTGGCATTAGTCTAGGATGCACTCTTCTGATATCACTGTCATTATTACTTGTTTATGTATATTGTTTGAGGAAAAGAGAGGCTTGTGAGAATAAGTGTGTGCCCTCTAAGTTAATTTCTGAAGTTTCAAACTATGTAAGTAAGCCAGAAGTGTATGAAGTTAGTATGATTATGCAAGCTACAATGAACCTCCATGAACGGTGTAGGATAGGGAAATCGATGTACAAGGCTAAAATCGATGGTCATGTTTTAGCTGTGAAAAATGTAAAGGAAGATATCACAGTCACAGAAGAGTTGATGATTCTACAGAAAGTAAATCATGCAAATCTTGTGAAACTAATTGGTGTCTCTTCTGGATATGATGGTGTAAATCACTTTCTTGTGTATGAATATGCTGAAAATGGATCTCTTTATAACTGGTTGTTCTCTGAGTTTTTCACTCTTAGTTGGAGTCAAAGGTTAAGCATAGCAATTGATGTTGCAATTGGTCTGCAATACATGCATGAACACACACAACCAAGTATAGTCCATAGGAAAATCAAATCAAGTAACATTCTTCTTGACTCAAACTTTAAGGCCAAGATATCAAATTTTTCTGTTGCAAGAACTACAAAGAATCCTATGATAACAAAAGTTGATGTTTTTGCTTATGGGGTGATTCTGTTGGAGTTAATAACAGGAAAGAAGTTTTTGTCGTGTATCGAAAATGCTGAGGTGAATATTTTGTGGAAAGATATTAAGGGAGTTTTTGATATAGAAGAAAAGAGAGAGGAAAGAGTTAGAAAATGGATTGATCCTAAGTTGGGGAGGATTTATAATGTTGTTGAAGCTATGAGTTTGTTCTCTTTGGCTATGAATTGCATAAAAGAACAAGTTTTGTTAAGACCAACTATGGGAGAAGTTGTTCTTAGCCTTTCTCTTCTCACTCAACACTCTCCTACTTTGTTAGAGAGATCTACTTATGGATTAGATGTTGAGGTTATTACTGGAGTGGTTAATTCCATCATAGCTCGTTGA 1770 0.3582 MVSSSIPDHTLFLAFMFFSATLMLLQLPQTNGTNFSYPLNSTPSYDTYVAYSAQSPNFLTLTSISDIFDTSPLSIARTSNIKDENMNLIPGQLLLIPITCGCSGNGNYSFANISHLIKQGESFYYLSTISYQNLTNWMTVEDSNPNLNPYMLTVGTKVIIPIFCSCPSKGIDLEYLITYIWKPNDNLTLVASMFGASPHDIITANANKFGQNFTAAANLPVFIPVKNLPALSQLYSSPERKRTNHFQIIISIGISLGCTLLISLSLLLVYVYCLRKREACENKCVPSKLISEVSNYVSKPEVYEVSMIMQATMNLHERCRIGKSMYKAKIDGHVLAVKNVKEDITVTEELMILQKVNHANLVKLIGVSSGYDGVNHFLVYEYAENGSLYNWLFSEFFTLSWSQRLSIAIDVAIGLQYMHEHTQPSIVHRKIKSSNILLDSNFKAKISNFSVARTTKNPMITKVDVFAYGVILLELITGKKFLSCIENAEVNILWKDIKGVFDIEEKREERVRKWIDPKLGRIYNVVEAMSLFSLAMNCIKEQVLLRPTMGEVVLSLSLLTQHSPTLLERSTYGLDVEVITGVVNSIIAR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4122 589 Gene3D Transferase(Phosphotransferase) domain 1 459 572 - -
Tpr4g4122 589 Gene3D Transferase(Phosphotransferase) domain 1 383 458 - -
Tpr4g4122 589 SUPERFAMILY Protein kinase-like (PK-like) 319 557 IPR011009 -
Tpr4g4122 589 Pfam Protein tyrosine and serine/threonine kinase 336 456 IPR001245 GO:0004672|GO:0006468
Tpr4g4122 589 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 18 589 - -
Tpr4g4122 589 CDD LysM 113 160 IPR018392 -
Tpr4g4122 589 Gene3D Phosphorylase Kinase; domain 1 288 382 - -
Tpr4g4122 589 ProSiteProfiles Protein kinase domain profile. 291 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4122 589 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 18 589 - -
Tpr4g4122 589 Pfam LysM domain 117 161 IPR018392 -
Tpr4g4122 589 Pfam LysM domain 60 97 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4122 Tpr-Chr4 48179910 48181945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4122 79 559 Receptor kinase-like Gene Family AT3G21630 29.760 4.37e-57 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr4g4122 PK_Tyr_Ser-Thr 2.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4122 - - vra:106777834 617.846