Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4118 ATGGGGGATATTAGGCTTAATAGGGTAGATCAAGGACAAACCAAGATTAAGAATGTTCCAATAGCTGTTACTCCTGAAGGGTTTTGGTGTTGTCCTTCACCTGTTGTGTTTCAGAAAAGTCATAAGCCTCAAAATCCTTTGAATAAAACTAAACCGTCTTCGTCACCACCACAACCGCAACCGAAAAATAGTGTTCAGAAAAAGCCGGTTCCAGTGCAAGTGACTGAGAGAAGAGGTTCTGCATCTGTATCTGCATCGTCTAGATTGGTTGTTTCTGATGATCAACAATGTAGTATTGGTTTGGAAAGGGCTTCAGCTGGGACATCTTTGGCTGGTGAGAGGGTATCTTCTAGACCTAAAATCGAAACCATGCCGAGAAAGGTAGCTATTGAGTTCGGTGAACCGGGAACTTGTGATATGAAGGTGGTTTTATTAGGGAAGCAGGGTTTTTCTGTTAAATTGAGTGTGCATCGGGATGTTCTGATAGAGAAGAGTAGTTTCTTTTCAGAAAAGTTTTCGGAACAATCAGATTTGTCTTCTCTACAAATCGGAGATTGTGAGGATGTTGAGATATATGTTGAAGCTGTTGGTTTGATGTATTGCAAGGAGATGAAACAGCGGCTCATGAAACAGAATGTTTCTCGCATTCTTCGGATTCTTAAGGTTGCAGAATTCCTTGGCTTCAGCTCGTGTGTCCAATCATGCTTAGAGTATTTGGAGGCTGTCCCATGGGTTGGAGATGAAGAAGAAGAAAAAGTGGTCTCAACTGTACTACAACTCCAAGGGGAAGGAATCGGAATCAACCCTGTATTGAAACGAGTTTCTTCTGATGTTTCCAATGTCCCGAAAGACACACTTTCCCACATTATCGAACTTGTTCTAAAAAGCAATGAGGAAAAAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTCAGAGAGAACAACAGTCTTCCGAGTTACGCCCGTTCCACTGACACCTGTAATGACATGATATATAGATCATGCAGAAGCTGCTTAGATTCATTATTATCTCTCTTCAAGCAGGCCGCAGAACCAACCTTTGCAGAGAAACCAAGTAATGAAAGAGATCTCGTAGTAAAGCATATAGCTCTAGAAGCCGATAACCTTTCATGGTTGCTCGATATTTTGGTTGACAAACAAGGAGCTGATGAGTTTGCGCTATTATGGGCAAACCAGCAGGAATTAGCCGTCTTACATGCAAATCTGCCGATTGTGTCTCGTTATCACGTTAGCTGCATTTCCGGAAGACTATTTGTCTGCATCGGTAGAGGGGAGTTGTTACCATCAAAGGAAACACGACAATTGTTGTTACAGACATGGTTGCAGCCGCTAATGAACGACTACAATTGGTTACAGCATGGATGCAGGTCATTTGATAGGAAACTTGTAGAGGAAGGAATCGGAAGGACAATTCTCACCTTACCTTTGGAAGATCAACAAAGTATTTTGCTTTCTTGGGTTGGAAGTTTCTTGAAAACAGGCGATAGCTGTCCTAATCTTCAAAGAGCTTTTGAGGTGTGGTGGCGTAGAACTTTCATTAGGCCGTATGTCGAAAATCAAGGTAATGCCGTGTCAGATAGTTCAACGGTGTCAAAGAAAGATGAATAA 1635 0.4208 MGDIRLNRVDQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSHKPQNPLNKTKPSSSPPQPQPKNSVQKKPVPVQVTERRGSASVSASSRLVVSDDQQCSIGLERASAGTSLAGERVSSRPKIETMPRKVAIEFGEPGTCDMKVVLLGKQGFSVKLSVHRDVLIEKSSFFSEKFSEQSDLSSLQIGDCEDVEIYVEAVGLMYCKEMKQRLMKQNVSRILRILKVAEFLGFSSCVQSCLEYLEAVPWVGDEEEEKVVSTVLQLQGEGIGINPVLKRVSSDVSNVPKDTLSHIIELVLKSNEEKGRREMKSIVLKLLRENNSLPSYARSTDTCNDMIYRSCRSCLDSLLSLFKQAAEPTFAEKPSNERDLVVKHIALEADNLSWLLDILVDKQGADEFALLWANQQELAVLHANLPIVSRYHVSCISGRLFVCIGRGELLPSKETRQLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNAVSDSSTVSKKDE* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4118 544 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 533 IPR038920 -
Tpr4g4118 544 MobiDBLite consensus disorder prediction 41 87 - -
Tpr4g4118 544 Pfam BTB/POZ domain 138 240 IPR000210 GO:0005515
Tpr4g4118 544 ProSiteProfiles BTB domain profile. 138 208 IPR000210 GO:0005515
Tpr4g4118 544 PANTHER BTB/POZ DOMAIN PROTEIN 1 533 - -
Tpr4g4118 544 Gene3D Potassium Channel Kv1.1; Chain A 132 259 IPR011333 -
Tpr4g4118 544 MobiDBLite consensus disorder prediction 50 64 - -
Tpr4g4118 544 SUPERFAMILY POZ domain 137 240 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4118 Tpr-Chr4 48084047 48088981 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tpr4g4118 BTB 0.00027 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4118 - - gmx:100789609 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4118 4 48084047 48088981 Tpr4g4118 4 48084047 48088981 ECH