Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4105 ATGTTCTATCATCACAAGTCAAATCTTTCTATCATCATCATCATCATCACAATCTTTGTAACGGTAATAACTGCTGATCAAAATAAACGTAACTGCAATAGAAGATGCGGAAAACAATTTGTAAAGTATCCATTCGGATTCTCTGATGATTGTGAAATCAAACTAAACTGCAACAGCAGCAACAAAGAACTCAAAATTGGTGAATTAAAAGTTCAAGAAGTGAATTCTGATAGCATATTCATATCTTTACCAGCAAAATGCAACCGTAGCACTAGTTTCATAGACCCACTTTTCGGTAAAAATTTCGCTCCAACATGGAACAATACGTTCCTTGTACAGAAATGTAATTCAAATCTTAGTGGTTGTGTTATTCCAACTTCAAGTTTCATTGGATCAAACATAGATGTTGAAGGTTGTGATGATAAAACAAGAAGTGATAACATCACTTGCTTTTCGCAATTGCAGCGTCAAAGAACGCGCGAGCACGAGGATGTTCTTACTGTTAATGATTGGAATAGAAATGGATGCAAATTCTTGTTTTCTGCTATTGCTGTTGATACCAGTAAAATCAAAGAGGTACCAATTCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTCAACTTGAAGGGACTTGTGGATGTTCTAATGATTCTAGTTGTACTGTGGTTCATCTTCACGGAGATAAACAGGGTTTCCGGTGTCGTTGCCACGAAGGTTTCGTCGGAGATGGATTTGTCAAAGGTTCTGGTTGCCGGAGAGTTTCTCAATGCAGACCTTCAACATTTGGGTCTAGCAAATGTGGAAAAGCACTCAGAATTGGTATACTTATTGGAGTGATCTTAGTTGGAGCCTCCGTGACGGCTGCTCTGGCTACACTATGCTACTTCGCCAAGCGCCGTTCCACGTGGCTGACAAAACAATTGACGGTAAAGCGCCTATTAAGAGAAGCTGCAGGCAACTACATTGTTCCTCTCTACCCTTACAAAGAAATAGAAAGAGCCACAAATTTTTTCTCAGAGAAACACAGGCTAGGAACCGGTGCTTACGGCACGGTTTATGCAGGAAACCTTCACAATGATGAATTGGTTGCTATAAAAAAGATCAGGTATAGAGACACCAATAGTGTTGACCAAGTCATGAATGAGATCAAGCTTCTTTCTTCGGTTAGTCACCCGAATTTAGTTCGACTCTTAGGCTGCTGCATAGAAAAAGGAGAGCATATACTTGTTTATGAGTATATGGCAAATGGAACATTATCTCAACATTTACAAAGAGAAAGAGGTGGAACACTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACTGCTAATGCTATAGCATTTCTCCACTCTTCAAATCCTCCAATTTATCATAGAGACATAAAATCTAGTAACATACTTTTGGACTTTAGCTTTCAATCGAAAGTAGCCGATTTCGGACTTTCTAGGCTAGGTATGACAGAAACATCGCATATCTCAACTGCGCCACAAGGGACACCGGGTTATGTTGATCCACAATACCACCAAAACTTTCACCTTTCTGATAAAAGTGATGTATATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACGGCAATGAAAGTGGTTGATTTCGGTAGACCTCAGAGTGAGATTAATTTAGCAGCACTTGCTGTTGAAAAAATTAGGAAAGGTCGTATCGAAGATATCATAGATCCTTTCCTTGATCTAAATAGGGATGCTTGGACACTCTATTCTGTTAACAAGGTAGCCGAGCTTGCATTTAGATGCCTTGCTTTTCATAGCGAAGCGAGACCTAGTATGATTGAAGTGGCCGAGGAGCTAGATCATATCAGACGCAGTGGATGGGCGACGATGGAGGAAACTATATGCATGGGCTCATCAGTTGGATCCACTTGTTCATCGCCTCGTAATAATGGAAATGAGAATTTAGTTTCGAGGAATGAGATATCGATTGTTCCACAAAAGACTAATAGTTTTTTGCATTCAATAGAGGAGGTGAAGGATAGTTCCCCTGTATCTATGCATGGTACTTGGTCAAGTAGACCTAGCTCACCTTCAGCAAACAGCTTATTGGGAAATGTTGTTCAGTGA 2097 0.4006 MFYHHKSNLSIIIIIITIFVTVITADQNKRNCNRRCGKQFVKYPFGFSDDCEIKLNCNSSNKELKIGELKVQEVNSDSIFISLPAKCNRSTSFIDPLFGKNFAPTWNNTFLVQKCNSNLSGCVIPTSSFIGSNIDVEGCDDKTRSDNITCFSQLQRQRTREHEDVLTVNDWNRNGCKFLFSAIAVDTSKIKEVPIQFQVVELGWWLQLEGTCGCSNDSSCTVVHLHGDKQGFRCRCHEGFVGDGFVKGSGCRRVSQCRPSTFGSSKCGKALRIGILIGVILVGASVTAALATLCYFAKRRSTWLTKQLTVKRLLREAAGNYIVPLYPYKEIERATNFFSEKHRLGTGAYGTVYAGNLHNDELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMANGTLSQHLQRERGGTLPWTIRLTIASETANAIAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAVEKIRKGRIEDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSEARPSMIEVAEELDHIRRSGWATMEETICMGSSVGSTCSSPRNNGNENLVSRNEISIVPQKTNSFLHSIEEVKDSSPVSMHGTWSSRPSSPSANSLLGNVVQ* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4105 698 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 17 650 - -
Tpr4g4105 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Tpr4g4105 698 SMART serkin_6 338 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4105 698 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 650 IPR045274 GO:0007166
Tpr4g4105 698 SUPERFAMILY Protein kinase-like (PK-like) 320 609 IPR011009 -
Tpr4g4105 698 CDD STKc_IRAK 344 612 - -
Tpr4g4105 698 Pfam Protein kinase domain 339 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4105 698 Gene3D Transferase(Phosphotransferase) domain 1 414 626 - -
Tpr4g4105 698 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4105 698 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Tpr4g4105 698 MobiDBLite consensus disorder prediction 674 698 - -
Tpr4g4105 698 MobiDBLite consensus disorder prediction 673 698 - -
Tpr4g4105 698 Gene3D Phosphorylase Kinase; domain 1 300 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4105 Tpr-Chr4 47899414 47904877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4105 15 696 Receptor kinase-like Gene Family AT2G23450 53.505 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tpr4g4105 Pkinase 4.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4105 - - lja:Lj4g3v0867570.1 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0902 2 10999375 11004299 Tpr4g4105 4 47899414 47904877 PCT