Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4081 ATGGCTTCGATTCTAGATGCTGTTATTGGGAAATTAGTTGAAGAACTAATGAGTTCAGTAGTTGAAATGAAAGATAGAGCTTTGAAATTCAAACCAACTCTAGAACGTTTAGAAACAACTCTGAAATCATTAGCACCATTGATCAAAGAAATAGATGAATATAACAAGAAACTCGATCGATCGCCTAAAGAAACAGATAGATTAATCAATCAAATGAAAGAGGGAAAAAAACTTGTTCTTAAATGTTCTGATAAAGAACAAATGAAGTGGTGGAACTGTTGTTACAAAAAAGCAGAATATCAAGAGAAACTTGAAGCATTAGATGATGAGATTAAGAGATTCTTTGAGCTTGATTTGAGAGCACAAGATGTAAGAAATGGGTTGGAAACACTTGTGGAGATTAAGGAGTTTAGAGCTGAATTTAGAAGTGGTGGTTTGAGGAATGAAAGGATTGAATTAAGAGGTGTTTGTTTGCCACCTCAACCACCTGGTTTTACTGTTGGGTTGGATGGTCCTTTGAATGAGTTGAAGATGAGATTGTTGAAGGATGAGGTTAGTGTTTCTGTTGTTACTGTTACTGGTTCTGGTGGTTCGGGGAAGTCTACCTTGGCGAAAAGGTTTTGTTGGGATGAACAAGTAAAAGGTAAATTCAAGGAAAATATCTTCTTCATTACCTTTGCAAAAACACCAAAGCTGAATGCTATAGTGCGGAAAATCTATCAACACACTGGTTACGAAGTTCCGGAGTTTCAAAGCGATGAAGACACGTTTAACCAATTGGAATATTTGATGAAACAAATTGTGAAAAAAAGTCCAATTTTGTTGGTCTTAGACGATGTTTGGCTGGAATCAGTATCACTTGTTGACAATTTTGTGTTTGAGATTCCAAACTACAAGATTATGGTTACATCAAGATTTGCAATTGCAAGATTTGGTCATCCATTTGTATTGAAACCTCTTTCTGAAGCACATGCTATAAATCTATTTAAGCATTCAGCATCCTTAACTAAGACCAGCTCAGATGTTCCTGATGATGTTGTCAAAAAGATAGTAAGATGTTGCAGCGGTTCTCCCTTAGCACTTCGAGTGAGTGGCAGATCATTAAGTAACGAACATCAGATAGTTTGGCTTAACCGAGCGAAAGAATTATCAGCTGGTAGTTCGATTCTTGATTCTAGCAAAGACGTGCTTTCTTGTCTCCAAAAGAGCTTAGATGTGTTGGATTCTAAATCCATGGAGTGTTTTAGGGACTTGGGCTTATTTCCTGAAGACCAAAGGATCCCTGCTGCTGCCCTTATTGATATGTGGGCAGAATTAAGGGATGATGATGAGGCCACTGCAATGGAGAGAATTTATAAGCTAGTTAACCTTAACTTGGCTGATATTATTGTGACAAGAAAAGTTGCAAGTGGTGCGATTGATTACAACTATCACTATGTTACACAATACGGTCTTCTTAGGGATCTAGCCATCCGTGATACTGACCAAGAGGCAGATGATAAGAGGAATCGACTCATAATTGACACAAGCGCAAATCATCTTCCGTCATGGTGGACTTCAGAGAATGAGTATCGCATTGCAGCTCGCATATTATCCATATCAACTGATGAAACATTCACTACAAAATGGTGCAACTTGCAGCCAACTAAAGTTGAGGCATTAGTGATAAACCTTAGAGAAAAGAAGTGCACATTACCAATGTTCATGAAGGAAATGAAAATACTAAAAGTTTTGATAATCACAAACTATGACTTCTATCCAGCTGAACTAGATAATTTCGAGCTGCTCGATCATCTAACGAGTCTCAAACGAATCAGATTTGAGAAAATTTCAGTTCCTTTCCTCGGAAAAACCATAGTTCACCTGAATAATCTTAAGAACTTTTCATTTTTTATGTGCAATGTGAATAAAGCATTTGAAAATTGCACTATCCAAGATTCAGAAATTCTACCAAGTTTGATGGAGATGAATTTTGACTATTGCAGTGATATGGTGCAATTACCAAATGTGATTTCCAACATTGTATCCCTAAAGAAGCTTAGTATCACAAATTGTCATAATCTTTGTGCACTTCATGAAGGAATTGGAAATTTGGTTAATTTGGAATCACTAAGGCTAAGTTCATGCAGTGATTTATCAGAGTTACCAAATTCAATCACAAATCTTCATAAGCTAAAGTTTCTTGATATTTCAGGATGCATAAGCCTTAGTCAATTACCTGAAAATATGTGTGAGTTGGAGAAGTTAGAAAAACTTAATATGAGAGGTTGTTCAAGTATAAGTGAATTGCCATCATCAATTATGGAACTTAAGGGATTAAAGCATGTGATATGTGATGAAGAGGCTGCTGAAAAATGGGAACCTTTTAGAAGTATTCTTGGTGATCTAAGAATAGAGGTTGTTCAAGAAGATTTTAATTTAAATTTTCTTTACAATTAA 2439 0.36 MASILDAVIGKLVEELMSSVVEMKDRALKFKPTLERLETTLKSLAPLIKEIDEYNKKLDRSPKETDRLINQMKEGKKLVLKCSDKEQMKWWNCCYKKAEYQEKLEALDDEIKRFFELDLRAQDVRNGLETLVEIKEFRAEFRSGGLRNERIELRGVCLPPQPPGFTVGLDGPLNELKMRLLKDEVSVSVVTVTGSGGSGKSTLAKRFCWDEQVKGKFKENIFFITFAKTPKLNAIVRKIYQHTGYEVPEFQSDEDTFNQLEYLMKQIVKKSPILLVLDDVWLESVSLVDNFVFEIPNYKIMVTSRFAIARFGHPFVLKPLSEAHAINLFKHSASLTKTSSDVPDDVVKKIVRCCSGSPLALRVSGRSLSNEHQIVWLNRAKELSAGSSILDSSKDVLSCLQKSLDVLDSKSMECFRDLGLFPEDQRIPAAALIDMWAELRDDDEATAMERIYKLVNLNLADIIVTRKVASGAIDYNYHYVTQYGLLRDLAIRDTDQEADDKRNRLIIDTSANHLPSWWTSENEYRIAARILSISTDETFTTKWCNLQPTKVEALVINLREKKCTLPMFMKEMKILKVLIITNYDFYPAELDNFELLDHLTSLKRIRFEKISVPFLGKTIVHLNNLKNFSFFMCNVNKAFENCTIQDSEILPSLMEMNFDYCSDMVQLPNVISNIVSLKKLSITNCHNLCALHEGIGNLVNLESLRLSSCSDLSELPNSITNLHKLKFLDISGCISLSQLPENMCELEKLEKLNMRGCSSISELPSSIMELKGLKHVICDEEAAEKWEPFRSILGDLRIEVVQEDFNLNFLYN* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4081 812 Gene3D - 319 403 IPR042197 -
Tpr4g4081 812 Coils Coil 812 812 - -
Tpr4g4081 812 Pfam NB-ARC domain 172 403 IPR002182 GO:0043531
Tpr4g4081 812 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 418 IPR027417 -
Tpr4g4081 812 SUPERFAMILY RNI-like 548 776 - -
Tpr4g4081 812 PRINTS Disease resistance protein signature 189 204 - -
Tpr4g4081 812 PRINTS Disease resistance protein signature 267 281 - -
Tpr4g4081 812 PRINTS Disease resistance protein signature 354 368 - -
Tpr4g4081 812 PRINTS Disease resistance protein signature 720 736 - -
Tpr4g4081 812 Gene3D Ribonuclease Inhibitor 509 793 IPR032675 -
Tpr4g4081 812 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 812 - -
Tpr4g4081 812 ProSiteProfiles RPW8 domain profile. 1 153 IPR008808 -
Tpr4g4081 812 Gene3D - 404 486 IPR036388 -
Tpr4g4081 812 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 812 IPR039203 GO:0050832
Tpr4g4081 812 Gene3D - 153 311 IPR027417 -
Tpr4g4081 812 Coils Coil 97 117 - -
Tpr4g4081 812 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 140 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4081 Tpr-Chr4 47644620 47649592 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4081 167 427 WRKY Transcription Factor Family AT5G45050 24.265 5.16e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4081 - - mtr:MTR_8g479450 1192.56