Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4076 ATGAACAGCACCACACAACTTATTGCCTCAACAACACCATTTCATGATGATGTGTTGAACAAGATATCGCAAATTGTTGAAAAAGCTCGAAAGAATCAGAATACAAGGCGATTGTTGAAGTCAGTTTTAAAGGAATTAACTTCTTTGGTCCAAGATATAAAGCAATACAATGAACATTTGGATCACCCTAGAGAAGAAATTAAGACTCTATTTGACGAAAATTATGCAATAGAAAGTGCATGTGAATGCTCTTGGTTCAGGAATGATTCATATGTTGCTGATGATGATAAGGAATCTATTACTGTAAAGGATGTTAAAGAGACACTTTATAAGGTTAGAGAAATTCTTGTGCTTCTTAGCAATGAAAATTTTGAACAGAAGTTCAATGAAGCTGGACCACCAATATTCAAGGGTCCTTTTGGTGTTCCTGAAAATCCAAAATTCATTGTTGGATTGGATATACCTTTTAGCAAGTTGAAAATGGAGCTTCTTAGAGATGGTAGTTCAACTCTTGTGTTGACTGGTTTAGGAGGCTTGGGAAAAACCACTTTGGCTACAAAGATTTGTTGGGATGAACATCTTAAGGGTAAATTCAAGGAAAATATTATATTTGTCACCTTCTCAAAAACACCCATGTTGAAGACTATTGTAGAGAGACTGTTTGAACATTGTGGATATCCAGTTCCTCAGTTTCAAAGTGAAGAAGATGCAGTTAATAGATTGGGACTTTTGTTGAAGAAAGTTGAGGGAGGTCCACTATTATTGGTGCTGGATGATGTTTGGACAAGCTCCGAAACCCTTGTTGAGAAACTTCAATTCCGAATATCAGATTTCAAAATTCTGGTGACTTCAAGGGTTGCATTACCAAGGTTTAGCACAACATGTATCTTAAAACCTCTTGTTCATGAAGATGCAGTAATACTTTTCCAACACTATGCTCAGATGGAAAAAAATAGTTCAGATTTTATCGACCAAGATCTTGTCGAAAAGGTTGTAACAAGTTGCAAAGGTTTACCTCTTGCGATTAAAGTGATTGCTACATCACTCAGAAATCGACCTTATGACTTGTGGCGAAAGATAGTGAAGGAACTGTCACAAGGTCATTCTATACTTGATTCTGCTAAATTACTTACTTGCCTCCAAAAGATCTTAGATGTTTTGGAAGATAATCCTATAATCAAGGAGTGTTTCATGGACCTAGTCCTATTTCCCGAAGACCATAGAATTCCTGTTGCTGCTCTCATTGATATGTGGACAGAGTCGTATGATCTAGATGACAACGGAATAGAAGCAATGGAAATCCTCAACAAATTAGGATCCATGAATCTGGCTAACGTCTTAATACCAAGGAAAAGTGCAAGTGACACAGATAATTACAACTACAATAACCACTTCGTCGTTCTTCATGATTTTCTAAGAGATCTTGGGATTTACCAAAGTACCAAGGAACCAATTGAGCTGAGAAAAAGACTGATTTTTGACATGAATGAAAATAAGTGTTTCGGGGAAAAGAAGCAAGGCTTGATGCCCCGTATATTGTCAAAACTTCTGACATTGTGTGTTAAACAAAATCCACTACAGCTCGCAACCCGGATATTGTCTGTATCAACTGATGAAACTTGTGCATCAGATTGGTCTCAAATGCAACCAGATCAAGCTGAGGTTCTGATTTTAAATCTTCATACAAAGCAGTACTTATTTCCCGATTCAATGGAGAAAATGATTATGCTCAAAGTTCTGATAATCACAAACTACGGTTTCCATCCTTCTGAATTGAATAATTTTGTGCTACTTGATTCTTTACACAACCTGAAAAGAATCAGACTCGAGCGAATTTCTGTTCCTTCCTTCGGGACATTGAAGAATCTGAAAAAACTATCGCTCTACATGTGTACTACTAGAATGGCTTTTGAAAACGGCAGCATCCTAATTTCAGACGCATTTCCAAATCTAGAAGAATTGAACATTGATTACTGCAAAGATTTGGTGGTATTGCCTACTGGTATCTGTGATATCACGCCTTTAAAGAAGCTCAGTGTTACTAATTGCCACAAGCTTTCTTCACTTCCCCAAGATATTGGAAAATTGGAGAATTTGGAACTTCTGAGGCTCAGTTCATGTACTGATTTGGAACTGATACCGAAATCCATTGGAAAGCTTTCGAATCTAACACTTCTTGACATCTCAAACTGCATAAGCCTTTCAAGTTTACCTGACGAATTTGGTAATCTGTGCAATCTAAGAAATCTTTACATGGCAGGCTGTGCAAGTTGTGAACTTCCATTCTCAGTCGTCAATCTTAAGAATTTGAAGGTGATAACATGCGATGAAGAGACGGCTGCTTCATGCGAAGCTTTCCAATCTATGCTTCCCAATATGAAGATAGAGGTTCCTCATGTTGATGTTAACTTAAATTGGCTTCATTAA 2427 0.3717 MNSTTQLIASTTPFHDDVLNKISQIVEKARKNQNTRRLLKSVLKELTSLVQDIKQYNEHLDHPREEIKTLFDENYAIESACECSWFRNDSYVADDDKESITVKDVKETLYKVREILVLLSNENFEQKFNEAGPPIFKGPFGVPENPKFIVGLDIPFSKLKMELLRDGSSTLVLTGLGGLGKTTLATKICWDEHLKGKFKENIIFVTFSKTPMLKTIVERLFEHCGYPVPQFQSEEDAVNRLGLLLKKVEGGPLLLVLDDVWTSSETLVEKLQFRISDFKILVTSRVALPRFSTTCILKPLVHEDAVILFQHYAQMEKNSSDFIDQDLVEKVVTSCKGLPLAIKVIATSLRNRPYDLWRKIVKELSQGHSILDSAKLLTCLQKILDVLEDNPIIKECFMDLVLFPEDHRIPVAALIDMWTESYDLDDNGIEAMEILNKLGSMNLANVLIPRKSASDTDNYNYNNHFVVLHDFLRDLGIYQSTKEPIELRKRLIFDMNENKCFGEKKQGLMPRILSKLLTLCVKQNPLQLATRILSVSTDETCASDWSQMQPDQAEVLILNLHTKQYLFPDSMEKMIMLKVLIITNYGFHPSELNNFVLLDSLHNLKRIRLERISVPSFGTLKNLKKLSLYMCTTRMAFENGSILISDAFPNLEELNIDYCKDLVVLPTGICDITPLKKLSVTNCHKLSSLPQDIGKLENLELLRLSSCTDLELIPKSIGKLSNLTLLDISNCISLSSLPDEFGNLCNLRNLYMAGCASCELPFSVVNLKNLKVITCDEETAASCEAFQSMLPNMKIEVPHVDVNLNWLH* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4076 808 Gene3D - 300 377 IPR042197 -
Tpr4g4076 808 Coils Coil 39 59 - -
Tpr4g4076 808 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 17 798 IPR039203 GO:0050832
Tpr4g4076 808 Gene3D - 380 476 IPR036388 -
Tpr4g4076 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 400 IPR027417 -
Tpr4g4076 808 Gene3D - 138 290 IPR027417 -
Tpr4g4076 808 SUPERFAMILY L domain-like 469 775 - -
Tpr4g4076 808 Pfam NB-ARC domain 158 366 IPR002182 GO:0043531
Tpr4g4076 808 Gene3D Ribonuclease Inhibitor 521 793 IPR032675 -
Tpr4g4076 808 PRINTS Disease resistance protein signature 170 185 - -
Tpr4g4076 808 PRINTS Disease resistance protein signature 247 261 - -
Tpr4g4076 808 PRINTS Disease resistance protein signature 335 349 - -
Tpr4g4076 808 PRINTS Disease resistance protein signature 718 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4076 Tpr-Chr4 47542818 47547088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4076 650 778 Receptor kinase-like Gene Family AT3G11080 33.077 2.72e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4076 - - gmx:112997603 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0881 2 10794590 10798404 Tpr4g4076 4 47542818 47547088 PCT