Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g4071 | ATGGTGAACCCTAGAGTCTACTTCGACATCAGTATCGGAGGCGAATTAGAGGGTAGAATCGTCATTGAACTCTTCAACGACGTCGTTCCCAAAACCGCCGAAAATTTCCGAGCACTATGCACCGGCGAAAAAGGAATCGGTCCAAACACCGGCGTTCCCCTTCATTTCAAGGGTTCATGTTTCCATCGTGTCGTCAAAGGCTTCATGATTCAAGGAGGTGACATTTCCGCTGGTGATGGAACCGGCGGTGAATCAATTTACGGTACGAATTTCGATGATGAAAATTTTGACCTAAAACATGAACGTAAAGGGATTTTATCTATGGCGAATACTGGTCCTAATACGAATGGTTCTCAGTTTTTTATTACTACTACTAGAACTCCTCATTTGGATGGAAAGCATGTGGTTTTTGGGAAGGTTATTAAAGGAATTGGGGTTGTTAGGTCTGTTGAACTTGGTGCTACCGGAGAGGATGATCGTCCGGAACAAGATGTTGTTATTGTTGATTGTGGTGAACTTGCTGAAGGAGAGGATGAAGGTGTTATTAACTTTTTTAAAGATGGTGATACTTTTGCTGATTGGCCTGTTGATCTTGATACCAAATCGGAGGAGCTTGAATGGTGGATGAATGCTGTTGATTCTATCAAAAGTTTCGGAAATGAGCATTATAAGAAGCAAGATTATAAGATGGCTATCAAAAAGTATCGCAAGGCTTTGCGCTATTTGGACATGTGTTGGGAGAAGGATGGCGTTGACCAAGATAAGAGCACTGCTTTAAGGAAGACAAAATCGCAAATCTTTACCAACAGTTCAGCCTGTAAATTGAAATTAGGTGACCTGAATGGAGCTTTACTGGACGCAGACTTTGCAATGCATGATGGAGATAATGCAAAAGCTCTGTTTCGCAAAGGCCAGGTGTATATGTTACTCAATGACCTAGATGCCGCTCTTGAAAGCTTCAAGAAAGCATTAGAATTGGAGCCAAATGATGGAGGGATCAAAAAAGAGTATGCAATTGTCAGGAAGAAGGTTGCTGATAGACATGATAAAGAGAAGAAAGCCTATTCTAAGATGTTCAATTAG | 1083 | 0.4146 | MVNPRVYFDISIGGELEGRIVIELFNDVVPKTAENFRALCTGEKGIGPNTGVPLHFKGSCFHRVVKGFMIQGGDISAGDGTGGESIYGTNFDDENFDLKHERKGILSMANTGPNTNGSQFFITTTRTPHLDGKHVVFGKVIKGIGVVRSVELGATGEDDRPEQDVVIVDCGELAEGEDEGVINFFKDGDTFADWPVDLDTKSEELEWWMNAVDSIKSFGNEHYKKQDYKMAIKKYRKALRYLDMCWEKDGVDQDKSTALRKTKSQIFTNSSACKLKLGDLNGALLDADFAMHDGDNAKALFRKGQVYMLLNDLDAALESFKKALELEPNDGGIKKEYAIVRKKVADRHDKEKKAYSKMFN* | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g4071 | 360 | CDD | cyclophilin_ABH_like | 4 | 171 | - | - | |
Tpr4g4071 | 360 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 56 | 73 | IPR020892 | GO:0003755|GO:0006457 | |
Tpr4g4071 | 360 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 360 | - | - | |
Tpr4g4071 | 360 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 24 | 39 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 61 | 73 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 104 | 119 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 119 | 131 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 132 | 147 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | ProSiteProfiles | TPR repeat region circular profile. | 297 | 330 | - | - | |
Tpr4g4071 | 360 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 7 | 172 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 8 | 171 | IPR002130 | GO:0000413|GO:0003755 | |
Tpr4g4071 | 360 | SMART | tpr_5 | 212 | 245 | IPR019734 | GO:0005515 | |
Tpr4g4071 | 360 | SMART | tpr_5 | 297 | 330 | IPR019734 | GO:0005515 | |
Tpr4g4071 | 360 | ProSiteProfiles | TPR repeat profile. | 297 | 330 | IPR019734 | GO:0005515 | |
Tpr4g4071 | 360 | SUPERFAMILY | Cyclophilin-like | 1 | 175 | IPR029000 | - | |
Tpr4g4071 | 360 | Gene3D | Tetratricopeptide repeat domain | 206 | 360 | IPR011990 | GO:0005515 | |
Tpr4g4071 | 360 | SUPERFAMILY | TPR-like | 205 | 358 | IPR011990 | GO:0005515 | |
Tpr4g4071 | 360 | Pfam | Tetratricopeptide repeat | 297 | 330 | IPR001440 | GO:0005515 | |
Tpr4g4071 | 360 | Gene3D | - | 1 | 179 | IPR029000 | - | |
Tpr4g4071 | 360 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 | 1 | 360 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g4071 | Tpr-Chr4 | 47506257 | 47510480 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g4071 | 17 | 170 | U-box Gene Family | AT5G67530 | 43.226 | 4.11e-33 | 127 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g4071 | K05864 | - | gmx:100803839 | 603.594 |