Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4067 ATGGGTCTCTGCATTTCTAAACCCAATTCTGAACCTCACAATAACATAATCATTCAATTACAACAAGAAATCACTGTTAATTCTGATTCAAATCCAGTAGTTGAAATTCAAAACCCTAAAAAATCACCTTTTTTCCCTTTTTACACTCCAAGTCCTGCTAACCATTTTTTCTCCGGTAAAACTCCGGGGAGATTCTTTAGACCGGCGTCTCCGGCCAAGCACATTAGGTCGTTACTTGCTCGGCGTCATGGTTCCGTTAAGCCGAATGCGGGTGCTAGTATTTCGGAAGGGAGTGAAAGTGAAGGTGTTGCTCCTCTTGATAAGAATTTTGGTTTTTCAAAGCATTTTGGTAGTAAATATCAGCTTGGTGAAGAAGTTGGTAGAGGACATTTTGGTTATACTTGTTCTGCTATTGTTAAGGTTAATCATAAGGGTGAGATTAAGGGTCATAATGTTGCTGTTAAGGTTATTCAGAAAGTTAAGATGACTACTGCTATTGCTATTGAGGATGTTAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACACAAAAATTTGATTAAATTCTATGAGGCTTATGAAGACCATGATAATGTCTATATAGTCATGGAGTTGTGCGAAGGAGGCGAGCTTTTGGACAGAATACTATCGAGAGGTGGGAAATACTCGGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAACGTTGTTGCATTTTGCCATCTACAAGGTGTTGTTCATCGTGATCTTAAACCTGAGAACTTCTTGTTTTCAACCAAAGACGAGAACTCAGAGCTGAAGGCGATAGACTTTGGCTTGTCAGATTTTGTCAAACTGGATGAACGGCTTAATGATATCGTTGGTAGTGCATACTATGTGGCTCCCGAGGTTCTGCATAGAGCTTACAATACAGAAGCTGACACATGGAGTATTGGCGTGATTGCATATATTTTATTATGTGGCAGTCGTCCATTTTGGGCACGAACTGAATCCGGGATCTTTCGTTCCGTATTGAAAGCTGATCCAACTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGATGAGGCACAAGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACTGCAGCGCAGGCATTAGGTCATCCATGGATTAAAAGTTATAAGATCGTAAAAGTACCCCTGGATATTCTGGTGTTCAAGCTCATGAAGTCATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGTTAGCTACTGATGAGCTGAATTATTTGAAGGAGCAGTTTTCACTTTTAGAACCAAACAAAAATGACACCATTAGCTTGGAAAATATTAAAGCGGCCTTGATGAAGAATGCAACAGATGCTATGAAGGAGTCACGCATTCCTGATCTTCTGGCATCACTCAATGCCTTGCAATATAGAAGAATGGATTTTGATGAGTTCTGTGCAGCTGCACTCAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGACCAACATGCACGCTGTGCCTATGAAATTTTTGAAAAGGATGGAAACAGAGCTATAATGATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTACCTGTTCATGCTGTTCTTCATGACTGGATTAGGCACACCGATGGAAAGTTAAGCTTCCTAGGGTTTGTTAAGTTGCTACACGGTCCTTCTAGAAGTCTTGTAAAACCTCAGTAA 1731 0.4079 MGLCISKPNSEPHNNIIIQLQQEITVNSDSNPVVEIQNPKKSPFFPFYTPSPANHFFSGKTPGRFFRPASPAKHIRSLLARRHGSVKPNAGASISEGSESEGVAPLDKNFGFSKHFGSKYQLGEEVGRGHFGYTCSAIVKVNHKGEIKGHNVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKLDERLNDIVGSAYYVAPEVLHRAYNTEADTWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPTFDEPPWPSLSDEAQDFVKRLLNKDPRKRMTAAQALGHPWIKSYKIVKVPLDILVFKLMKSYMRSSSLRKAALRALSKTLATDELNYLKEQFSLLEPNKNDTISLENIKAALMKNATDAMKESRIPDLLASLNALQYRRMDFDEFCAAALSVHQLEALDRWDQHARCAYEIFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4067 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Tpr4g4067 576 Gene3D - 403 564 - -
Tpr4g4067 576 ProSitePatterns Protein kinases ATP-binding region signature. 126 155 IPR017441 GO:0005524
Tpr4g4067 576 SUPERFAMILY Protein kinase-like (PK-like) 117 414 IPR011009 -
Tpr4g4067 576 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 571 - -
Tpr4g4067 576 CDD STKc_CAMK 119 384 - -
Tpr4g4067 576 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 30 571 - -
Tpr4g4067 576 SMART serkin_6 120 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4067 576 SUPERFAMILY EF-hand 413 567 IPR011992 -
Tpr4g4067 576 Gene3D - 425 494 - -
Tpr4g4067 576 Gene3D Phosphorylase Kinase; domain 1 113 211 - -
Tpr4g4067 576 Pfam Protein kinase domain 120 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4067 576 ProSiteProfiles Protein kinase domain profile. 120 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g4067 576 Gene3D Transferase(Phosphotransferase) domain 1 212 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4067 Tpr-Chr4 47482549 47486698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4067 1 574 EF-hand Containing Proteins AT3G50530 70.820 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr4g4067 Pkinase 4.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4067 K00924 - gmx:100803313 923.694